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S15_scaffold_359_curated

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_359_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..647
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NX21_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34877.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcription activator, effector binding
S15_scaffold_359_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

682..1383
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0C6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34876.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_359_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1450..2508)
DNA (1059bp) protein (353aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0003640063 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34875.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
twin-arginine translocation pathway signal rbh
S15_scaffold_359_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2870..4399
DNA (1530bp) protein (510aa)
Signal recognition particle protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2D6_9BRAD rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ffh; signal recognition particle protein Ffh rbh
S15_scaffold_359_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4445..4777
DNA (333bp) protein (111aa)
30S ribosomal protein S16 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P944_9BRAD
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpsP; 30S ribosomal protein S16
S15_scaffold_359_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4932..5474
DNA (543bp) protein (181aa)
Ribosome maturation factor RimM n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NX18_9BRAD rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rimM; ribosome maturation factor RimM
S15_scaffold_359_curated_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5823..6062
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NU93_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33887.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
S15_scaffold_359_curated_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6151..6882
DNA (732bp) protein (244aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31) rbh
tRNA (guanine-N1)-methyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002DF6D29 rbh
S15_scaffold_359_curated_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6985..7383
DNA (399bp) protein (133aa)
50S ribosomal protein L19 n=2 Tax=Bradyrhizobiaceae RepID=F7QHQ2_9BRAD
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
rplS; 50S ribosomal protein L19
S15_scaffold_359_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7465..7878)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2D2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34869.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
glyoxalase/bleomycin resistance
S15_scaffold_359_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8165..9577
DNA (1413bp) protein (471aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33) rbh
3-isopropylmalate dehydratase large subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P942_9BRAD rbh
S15_scaffold_359_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9654..10034)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NX14_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34867.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_359_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10258..10509)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0B7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34866.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_359_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10732..11037)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5C2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34865.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_359_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11205..11603
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2C7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34864.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_359_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11596..11835)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P937_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34863.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_359_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11922..12527
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) rbh
isopropylmalate isomerase n=1 Tax=Afipia birgiae RepID=UPI0003086668 rbh
S15_scaffold_359_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12822..13703)
DNA (882bp) protein (294aa)
citrate lyase subunit beta (EC:4.1.3.34) rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0B4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34861.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_359_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13931..14584
DNA (654bp) protein (218aa)
carbonic anhydrase 2 (EC:4.2.1.1) rbh
carbonate dehydratase n=1 Tax=Afipia birgiae RepID=UPI000300455E rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34860.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_359_curated_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14600..15184)
DNA (585bp) protein (195aa)
UPF0114 protein HMPREF9695_04769 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2C2_9BRAD rbh
UPF0114 protein HMPREF9695_04769 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_359_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15226..16260)
DNA (1035bp) protein (345aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P933_9BRAD rbh
aspartate-semialdehyde dehydrogenase rbh
S15_scaffold_359_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16470..17285
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NX06_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34857.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_359_curated_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17325..18059
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0A9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34856.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_359_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18197..18574
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5B4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34855.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_359_curated_25
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18731..19843)
DNA (1113bp) protein (371aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85) rbh
3-isopropylmalate dehydrogenase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHN6_9BRAD rbh
S15_scaffold_359_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20239..21417
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NX03_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34852.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
major facilitator transporter rbh
S15_scaffold_359_curated_27
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21418..21900)
DNA (483bp) protein (161aa)
thioesterase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000373A50F
Uncharacterized protein {ECO:0000313|EMBL:CCD85555.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
S15_scaffold_359_curated_28
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22029..22631
DNA (603bp) protein (201aa)
Transcriptional regulatory protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q140_9RHIZ
Transcriptional regulatory protein {ECO:0000313|EMBL:EKF57374.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
transcriptional regulatory protein
S15_scaffold_359_curated_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22771..25956)
DNA (3186bp) protein (1062aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0A4_9BRAD rbh
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKS34851.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative component of multidrug efflux pump, AcrB/AcrD/AcrF family rbh
S15_scaffold_359_curated_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26125..27339)
DNA (1215bp) protein (405aa)
RND transporter n=1 Tax=Afipia birgiae RepID=UPI0002E07D59 rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS34850.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
secretion protein HlyD rbh
Displaying items 1-30 of 47 in total

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