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S15_scaffold_408_curated

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_408_curated_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1020..2027
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VD84_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89007.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
S15_scaffold_408_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1977..2474)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKH3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41239.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_408_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2489..3421)
DNA (933bp) protein (311aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14) rbh
glycyl-tRNA synthetase subunit alpha n=1 Tax=Afipia birgiae RepID=UPI0003611242 rbh
S15_scaffold_408_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3928..4113)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF58_9BRAD">RepID=K8PF58_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41237.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_408_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4129..5016)
DNA (888bp) protein (296aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIA5_9BRAD rbh
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:EKS41236.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
peptidase S49 rbh
S15_scaffold_408_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5388..6179)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKG8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41234.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
methyltransferase small rbh
S15_scaffold_408_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6172..6399)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSC6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41233.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_408_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6483..7493
DNA (1011bp) protein (337aa)
ispB; octaprenyl-diphosphate synthase IspB (EC:2.5.1.-) rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF44_9BRAD">RepID=K8PF44_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41232.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_408_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7643..8521)
DNA (879bp) protein (293aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI90_9BRAD rbh
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase rbh
S15_scaffold_408_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8655..10445)
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PP11_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41230.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_408_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10603..12264)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKF5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41229.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
electrotransfer ubiquinone oxidoreductase rbh
S15_scaffold_408_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12397..13185
DNA (789bp) protein (263aa)
Uracil-DNA glycosylase, family 4 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSB3_9BRAD rbh
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EKS41228.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
uracil-DNA glycosylase, family 4 rbh
S15_scaffold_408_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13306..14514
DNA (1209bp) protein (403aa)
MFS transporter n=1 Tax=Afipia birgiae RepID=UPI0002E578A1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41226.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
MFS permease rbh
S15_scaffold_408_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14516..15844)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNZ9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41225.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
xanthine/uracil/vitamin C permease rbh
S15_scaffold_408_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15857..17368)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKC9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41224.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_408_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17432..18130)
DNA (699bp) protein (233aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rnhB; ribonuclease HII (EC:3.1.26.4) rbh
Ribonuclease HII n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSA7_9BRAD rbh
S15_scaffold_408_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18243..18692)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF21_9BRAD">RepID=K8PF21_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41222.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_408_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18712..19872)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI71_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41221.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_408_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20102..20674
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNZ2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41220.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_408_curated_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20765..21700
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NUP7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32866.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
transcriptional regulator rbh
S15_scaffold_408_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21858..22409)
DNA (552bp) protein (184aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Afipia broomeae ATCC 49717 PF15_9BRAD">RepID=K8PF15_9BRAD rbh
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
moaB; molybdenum cofactor biosynthesis protein B rbh
S15_scaffold_408_curated_22
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22560..23504)
DNA (945bp) protein (315aa)
Zinc metalloprotease superfamily protein n=2 Tax=Bradyrhizobiaceae RepID=F7QJK5_9BRAD rbh
Zinc metalloprotease superfamily protein {ECO:0000313|EMBL:EGP08730.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
zinc metalloprotease rbh
S15_scaffold_408_curated_23
unknown

Not on your lists

23534..23737
DNA (204bp) protein (68aa)

This feature has no annotations

S15_scaffold_408_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24042..25175
DNA (1134bp) protein (378aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
modification methylase n=1 Tax=Afipia birgiae RepID=UPI00035C78CE rbh
DNA methylase N-4/N-6 rbh
S15_scaffold_408_curated_25
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25492..26886
DNA (1395bp) protein (465aa)
RTX cytolytic toxin n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I736_GRIHO
RTX cytolytic toxin {ECO:0000313|EMBL:EEY72455.1}; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia hollisae CIP 101886.;"
hemolysin-type calcium-binding protein
S15_scaffold_408_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27022..27450)
DNA (429bp) protein (143aa)
ketosteroid isomerase n=1 Tax=Afipia birgiae RepID=UPI000360AA91
Uncharacterized protein {ECO:0000313|EMBL:EKS41214.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ketosteroid isomerase
S15_scaffold_408_curated_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27486..28469
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PS93_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41213.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcriptional regulator rbh
S15_scaffold_408_curated_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28464..28937)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B60300
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
S15_scaffold_408_curated_29
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28956..29780)
DNA (825bp) protein (275aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2ZSG2_9CAUL
Putative transcriptional regulator {ECO:0000313|EMBL:EJL21694.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
helix-turn-helix domain protein
S15_scaffold_408_curated_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29941..31227
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF08_9BRAD">RepID=K8PF08_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41212.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative FAD-dependent monooxygenase rbh
Displaying items 1-30 of 35 in total

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