ggKbase home page

S15_scaffold_733_curated

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_733_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1876
DNA (1875bp) protein (625aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20) rbh
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P523_9BRAD rbh
S15_scaffold_733_curated_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2028..2696)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS24_NITHX rbh
ATP-binding domain-containing protein {ECO:0000313|EMBL:KJC61851.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein rbh
S15_scaffold_733_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2708..4147)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P228_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34739.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
twin-arginine translocation pathway signal rbh
S15_scaffold_733_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4340..5224
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8T2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34738.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
lipo-like protein
S15_scaffold_733_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5480..6232
DNA (753bp) protein (251aa)
CysZ n=1 Tax=Afipia birgiae RepID=UPI0002E524E4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34737.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
CysZ-like protein rbh
S15_scaffold_733_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6234..6986)
DNA (753bp) protein (251aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
nth; endonuclease III (EC:4.2.99.18) rbh
Endonuclease III n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P003_9BRAD rbh
S15_scaffold_733_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7009..7533
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P518_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34735.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_733_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7611..8531
DNA (921bp) protein (307aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P223_9BRAD rbh
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:EKS34734.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
AraC family transcriptional regulator rbh
S15_scaffold_733_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8688..9311)
DNA (624bp) protein (208aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
phosphoglyceromutase (EC:5.4.2.1) rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8R9_9BRAD rbh
S15_scaffold_733_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9340..10155)
DNA (816bp) protein (272aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
dapB; dihydrodipicolinate reductase (EC:1.3.1.26) rbh
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWQ0_9BRAD rbh
S15_scaffold_733_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10366..11355
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZZ6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34731.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_733_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11417..11722)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P507_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34730.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_733_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11874..12581)
DNA (708bp) protein (236aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P213_9BRAD rbh
orotidine 5'-phosphate decarboxylase
S15_scaffold_733_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12588..13169)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8Q1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34728.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
NADPH-dependent FMN reductase
S15_scaffold_733_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13346..13666)
DNA (321bp) protein (107aa)
methyltransferase n=1 Tax=Afipia birgiae RepID=UPI00037E4C6B
Uncharacterized protein {ECO:0000313|EMBL:EKS34727.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ribosomal RNA adenine methylase transferase
Displaying 15 items

View Taxonomy