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S15_scaffold_229_curated

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Displaying items 1-30 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_229_curated_1
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159..677
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TUV5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ04301.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
hypothetical protein
S15_scaffold_229_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(724..1602)
DNA (879bp) protein (293aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14) rbh
ATP synthase gamma chain n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZG1_9BRAD rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_229_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1752..3284)
DNA (1533bp) protein (511aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
F0F1 ATP synthase subunit alpha (EC:3.6.3.14) rbh
ATP synthase subunit alpha n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NW77_9BRAD rbh
S15_scaffold_229_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3284..3844)
DNA (561bp) protein (187aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14) rbh
ATP synthase subunit delta n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P882_9BRAD rbh
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_229_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4434..5501
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1I5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34599.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
methyl-accepting chemotaxis sensory transducer rbh
S15_scaffold_229_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5874..6311
DNA (438bp) protein (146aa)
Rare lipoprotein A n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4K4_9BRAD
Rare lipoprotein A {ECO:0000313|EMBL:EKS34600.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rare lipoprotein A family protein
S15_scaffold_229_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6600..8774)
DNA (2175bp) protein (725aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Primosomal protein N n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZG6_9BRAD rbh
primosome assembly protein PriA rbh
S15_scaffold_229_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9039..10022
DNA (984bp) protein (328aa)
Tyrosine recombinase XerC n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NW82_9BRAD rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
xerC; site-specific tyrosine recombinase XerC rbh
S15_scaffold_229_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10119..10709
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P887_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34603.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_229_curated_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10728..11579
DNA (852bp) protein (284aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QRB6_9BRAD rbh
Epimerase {ECO:0000313|EMBL:KIZ45317.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
NAD-dependent epimerase/dehydratase rbh
S15_scaffold_229_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11586..12110)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1J1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34604.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_229_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12261..13664)
DNA (1404bp) protein (468aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
lpdA; dihydrolipoamide dehydrogenase (EC:1.8.1.4) rbh
Dihydrolipoyl dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4L1_9BRAD rbh
S15_scaffold_229_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13697..14440)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZH3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34606.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
oxidoreductase rbh
S15_scaffold_229_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14464..15105)
DNA (642bp) protein (214aa)
Homoserine/Threonine efflux protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NW86_9BRAD rbh
Homoserine/Threonine efflux protein {ECO:0000313|EMBL:EKS34607.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
amino acid efflux transmembrane protein
S15_scaffold_229_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15110..16342)
DNA (1233bp) protein (411aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sucB; dihydrolipoamide succinyltransferase (EC:2.3.1.61) rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P891_9BRAD rbh
S15_scaffold_229_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16444..19395)
DNA (2952bp) protein (984aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2) rbh
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1J9_9BRAD rbh
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:EKS34609.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_229_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19531..20415)
DNA (885bp) protein (295aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4L7_9BRAD rbh
succinyl-CoA synthetase subunit alpha rbh
S15_scaffold_229_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20420..21616)
DNA (1197bp) protein (399aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
succinyl-CoA synthetase subunit beta (EC:6.2.1.5) rbh
malate--CoA ligase subunit beta n=1 Tax=Afipia birgiae RepID=UPI00031F8F60 rbh
S15_scaffold_229_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21730..22698)
DNA (969bp) protein (323aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
malate dehydrogenase (EC:1.1.1.37) rbh
Malate dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NW90_9BRAD rbh
S15_scaffold_229_curated_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22887..24068)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P898_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34613.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
AFG1-like ATPase rbh
S15_scaffold_229_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24129..24665)
DNA (537bp) protein (179aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
2''''-5'''' RNA ligase n=1 Tax=Afipia birgiae RepID=UPI000303C54A rbh
2',5' RNA ligase rbh
S15_scaffold_229_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24772..25440)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4M1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34615.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
GDSL family lipase
S15_scaffold_229_curated_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25490..26236
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZI6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34616.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter-like protein rbh
S15_scaffold_229_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26233..28803
DNA (2571bp) protein (857aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NW96_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34617.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
glycosyl transferase family 1
S15_scaffold_229_curated_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29012..29803
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8A3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34618.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_229_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30041..30568
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1L2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34619.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
GCN5-like N-acetyltransferase
S15_scaffold_229_curated_27
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30572..30874)
DNA (303bp) protein (101aa)
Transcriptional regulator, ArsR family protein n=1 Tax=Rhizobium sp. RepID=L0NM47_RHISP
Transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDN55036.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
S15_scaffold_229_curated_28
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30950..31294
DNA (345bp) protein (115aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
alkylhydroperoxidase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000373FC73
alkylhydroperoxidase AhpD family core domain-containing protein
S15_scaffold_229_curated_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31307..31675)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4M6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34620.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_229_curated_30
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32076..32846)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P297_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP09666.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein rbh
Displaying items 1-30 of 79 in total

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