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S15_scaffold_342_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_342_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..644
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF86_9BRAD">RepID=K8PF86_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37053.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_342_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(898..2148)
DNA (1251bp) protein (417aa)
delta-9 acyl-phospholipid desaturase (EC:1.14.19.-) rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P394_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37052.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_342_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2268..2393
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=3 Tax=Bradyrhizobiaceae RepID=F7QG16_9BRAD
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rpmJ; 50S ribosomal protein L36
S15_scaffold_342_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2529..3185
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBQ4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37050.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_342_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3287..4255
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8C2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37049.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
alpha/beta hydrolase fold rbh
S15_scaffold_342_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4432..4815
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF80_9BRAD">RepID=K8PF80_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37048.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative signal peptide protein
S15_scaffold_342_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4980..5381
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P389_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37047.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_342_curated_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5822..7297
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003625825 rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10131.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein rbh
S15_scaffold_342_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7314..8750)
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
pyruvate kinase (EC:2.7.1.40) rbh
Pyruvate kinase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6C7_9BRAD rbh
S15_scaffold_342_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8747..9298)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBQ0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37045.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_342_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9572..9874
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8B9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37044.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
alkaline phosphatase
S15_scaffold_342_curated_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10048..10320
DNA (273bp) protein (91aa)
UPF0335 protein HMPREF9696_02499 n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NY35_9BRAD
UPF0335 protein HMPREF9696_02499 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
S15_scaffold_342_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10498..12159)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P385_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37042.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_342_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12587..13684)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6C3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37041.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
peptidoglycan binding domain-containing protein rbh
S15_scaffold_342_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15017..16531)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBP6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37040.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
two component sigma54 specific Fis family transcriptional regulator rbh
S15_scaffold_342_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16686..18575
DNA (1890bp) protein (630aa)
PepF/M3 family oligoendopeptidase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8B4_9BRAD rbh
PepF/M3 family oligoendopeptidase {ECO:0000313|EMBL:EKS37039.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
oligoendopeptidase, PepF/M3 family rbh
S15_scaffold_342_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18764..18916
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF72_9BRAD">RepID=K8PF72_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37038.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
aa3 type cytochrome c oxidase subunit IV
S15_scaffold_342_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18988..20115
DNA (1128bp) protein (376aa)
NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2) rbh
NAD(P) transhydrogenase subunit alpha n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P380_9BRAD rbh
NAD(P)(+) transhydrogenase (AB-specific), alpha subunit {ECO:0000313|EMBL:EKS37037.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_342_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20127..20447
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6B9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37036.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
NAD(P) transhydrogenase subunit alpha
S15_scaffold_342_curated_20
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20461..21861
DNA (1401bp) protein (467aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
pntB; NAD(P) transhydrogenase subunit beta (EC:1.6.1.2) rbh
NAD(P) transhydrogenase subunit beta n=2 Tax=Bradyrhizobiaceae RepID=F7QG00_9BRAD rbh
S15_scaffold_342_curated_21
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21922..22305)
DNA (384bp) protein (128aa)
Lactoylglutathione lyase n=2 Tax=Bradyrhizobiaceae RepID=F7QFZ9_9BRAD
Lactoylglutathione lyase {ECO:0000313|EMBL:EGP09941.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
S15_scaffold_342_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22438..23517
DNA (1080bp) protein (360aa)
Calcium/proton exchanger n=1 Tax=Afipia broomeae ATCC 49717 PF67_9BRAD">RepID=K8PF67_9BRAD rbh
Calcium/proton exchanger {ECO:0000313|EMBL:EKS37033.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ionic transporter y4hA
S15_scaffold_342_curated_23
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23605..24084
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E49121
Uncharacterized protein {ECO:0000313|EMBL:CCD87552.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
S15_scaffold_342_curated_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24146..24436
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031B6134
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65191.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
S15_scaffold_342_curated_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24504..25904
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003812531 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38604.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
outer membrane efflux protein
S15_scaffold_342_curated_26
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25916..27304
DNA (1389bp) protein (463aa)
copper oxidase n=1 Tax=Afipia birgiae RepID=UPI0002DFB4CB rbh
multicopper oxidase type 3 rbh
Multicopper oxidase type 3 {ECO:0000313|EMBL:ABS70110.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S15_scaffold_342_curated_27
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27318..27788
DNA (471bp) protein (157aa)
copper tolerance protein n=1 Tax=Afipia birgiae RepID=UPI0002F87BCE
blue (type1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ABS70109.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S15_scaffold_342_curated_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27885..28190
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAM2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38601.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_342_curated_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28333..29292
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P373_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37032.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_342_curated_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29368..29814)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6B3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37031.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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