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S15_scaffold_331_curated_8

Organism: S15_Afipia_broomeae_61_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(8118..11579)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P693_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 1159.0
  • Bit_score: 2000
  • Evalue 0.0
  • rbh
PAS domain S-box protein {ECO:0000313|EMBL:EKS37006.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 1159.0
  • Bit_score: 2000
  • Evalue 0.0
PAS/PAC sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 1230.0
  • Bit_score: 1084
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3462
ATGAGCGAAGCCGACTTCCAGCTCCATGGCATCCGCGATCCGCGCCTTGCGGTTCACGCGACAAGCAGCTTGCCTGCGTGGGTCTGGTCGCTCGACGGCGCCCACATTCTCTGGGCCAACACCATCGGAGCGCGGCTGTTCGGCGAACGCAACGCCGCCGCCCTCGCCGAGAAAACCATCGGCCCCGCCGACCCGCACCGCCGTCAGGCCGCACAGCTTGCAGCGCGGCTGTCGCCGTCGGGTGCGCCGCGACTCGAACGGCTGCGCGGTTTCGGTGCGCCGCTCGGCCGCCTGCTGACATGCTCATGCGCGCGTCTCACGTTCGCCGACGGACGCACAGGAATTCTCATCGCCGCAGCCGATCCTGTCGGACGTCCGATGCCGCTCACCGAGCGGCTCGCACATCTGGTGGACAGTATCGCGATGCCGGCCATGACCTTCACGCCCAATGGCGCGCTTGCGGGCGCCAACATGGCTGCGAAAAACTTCCCCGGACTGTTCAGCGATCTGACCGGACCCGGTTTCGACGAGGCGCGCAACGGCGCGTTGCGTAACGGACAATCGATCCTGCAAATGGACTCCAGCCGCGTCACGGTCCACCGCGTCGGCAGCGGCGACGGGACCGCGCTGGTCGCATTGATCGACGCCGTGATCGTGCCGAAACCAATGCCGAAACCGACACCCGTGGTTCTCCCGTCTGAAGAGATTGAGCCGGTTCGCGAGAACGTCACCGAACAGGCTGCGCAAACTGCGCCGGTTGAACCTGCTCCGGCTGAAACGGCGGCGGAAACTGCCGCAGATATCTCCGATCAAACCACCGCGCCAGCCGAAGTGACGCCGGTCGATCTTTTCGAATCCGTGTTCGATGAATCATCAGAACCGGAAGCACCGGCCCGGACCGCCGCGGACACCGAAGCTGCGCCTCAACACATTGCGAGCGAACAACCCAAGCCGGTTACGCATGCCGACGCGCCGCGCGAAGAACCCGCAGGTCACGGCGCGCCGGTAGAGAACGTCACCCGGATTTACATCGACGACGAGCGCCGCAAACCCGCTTCTCCGATAATGGGCTCCGGCGATGATGTGTCCGCAACGCTGCTCGAGATGGACGGCCCGCCGTTGACGCCGCGGCGGCATCCGCTGCGCTTCATGTGGCACATGGACGAGGACAGCCGCTTCTCGCTCGGCTTCGATGAATTCACCCGCCTGATCGGCGCGCGCACCGCTGCCGCGTTCGGCCGGCCATGGGGCGAGATCGCCGATGCGCTCGGTCTCGATCCCGAAGGCCAGGTGGCGGCGGCGGTCGCAACCCGCGATACCTGGAGCGGCATCATTGTGAACTGGCCCGCCGACGGCGCAGGCGCGCGGCTGCCGGTCGAGCTGTCGGGATTGCCGATCTACGACCGCGCCGGACAATTTCTCGGCTATCGCGGCTTCGGCATCTGCCGCGACGTCGAAGGCATGGCGCGGCTGGCCGCAGAGCGCCGCGACGACATGCTGTATTCGGCAAAGCCGCCAGCAGCGGCGCAGCCGAGCGAACCGCCGCCGCCAAATGTGACGATCCCGGAGCCGGTCAACGAACACATTGTGGACGAGCCTGCATCAAGCGTGCTTCCGTCAGAGACGGTGCATGCCGCGGACAGCGTGCAAGACAATTTCCCCAGGGACAGTTTCCCGAGAGCCGAGCAGAAGCCCGTGGTGGACACTCCGCAAAACGTCGTGCCGTTTCCAGTCGCCGAGCCGAAGTCGCCGGCGTTGACGGCGGTCGAGAGCAACGCCTTCGACGAACTGGCGCGGCGACTGTCGGCGCGTCTCGATAATGCAGCGGAGAGCGAAACGCTCACCGACGCCTCGGTGGCCGAACTGTTCGCCGCCGACGGCGCTGCGCAACCGCATGAACCTGTGTCCGAACCGCCTGCGCCTGAACATCCCCCTGCCTTCCTCCAGCCGGAGCCGGTCCTGCCGCGTGCCAATGCCGCGCAGGATTCGCAGTTGCTCGACCGACTTCCGACCGGCGTCCTGGTGTATCGGCTCGACCGGCTGCTCTACGCCAACAAGGCATTCCTTGCGTCGACCGGATATGACGACCTCCATGCGCTGACCGAGGCCGGCGGCCTCGATGCGCTGACCGTCGAACCCGGTGCGGGATCTGCCAGCAGCACCTCCGAGACCGGCACGCCCGTCGTGATCGCCGCCACCAGCAAGAGCGGCCCCGACAAGGGCGAGCCCGCCGACGCGCGGCTGTTCGCCATAACATGGGACAACGAGCCGGCGCATGCACTGGTGTTCTCCGGCCCGCGCATCGATCCCGTTTTGGCGATCACACCGATCACGGCGGCCAGCGATGACACCACACAGGCCGAAGAGCTCGGCACCATTCTCGACAACACCGCCGAGGGCGTCATTGTCTTCGACGGCCAGGGCCGCGTCCTTTCCTGCAATCGCAGCGCCGAGGTTCTGTTCGGCCGCGACGATAACGAGATGGCCACCCTCAATCTGACCGATCTGTTCGCGGCGGACAGCCAGCGCGCGGTGCAGGACTATGTGAACGATGTCAGGACCGCCGCGGTGACAAGCCTGCTCAACCACGACCGCGAGATGCTGGGCCGCGCCCGCGACGGCGGCGTCATTCCGCTGTCGATGACCCTGGGCCGGACGCGGCCTGACGGCGCACGCTTTTTCGCGATCTTCCGCAACCAGTCGCAGGCCAGGAAAAGCGAAGGCGAACTGGTGCAGGCGCGGCGGCAGGTCGAACGCGCGACGAACGCCCGTGCGGACATCCTCGGCCGGATCAGCCACGAAGTCCGCATGCCACTGAGCGCCATTATCGGCTTTGCCGACGTGATGATCGATGAGCGCTTCGGCGCACTCGGCAACGAACGCTATGTCGAATACATGAAGGACATCCGCGCCTCTGGACAGCGCGTGATGGCGATCATCGACGATCTGCTCGACCTGTCGCGTATCGAAACCGGCAAGATGGACCTGTCGTTCGCGAGCCAGGACCTCAACAGCATGGTCGAGCAATGCGTCGCGGTGATGCAGCCGCAGGCCAACCGCGAACGCATCATTATCCGCACCTCGCTCGCCCACGCACTGCCGACGGTGAAAGCCGACGCCCGCGCGCTGCGCCAGATCGCGCTGAACCTGATCGGCAACTCGATCCATCTGGCCAATGCCGGCGGGCAGGTCATCGTCTCGACCGCAACCACCGATTTCGGCGATATCGTGCTGCGCGTCCGCGACACCGGCCCCGGCCTCAATGACAACGAGATCGCCGCCGCCATGGCGCCGTTCCGCACGACAGGCGCATCGGACCAGACTGCCGATGGTTCGGTTGTGAACCTGTCGCTGACCAAGGCGCTGGTCGAGGCCAACCGCGCGCAATTTCATATCAAGACCGCGCCGCATTCGGGCACGCTGATCGAGGTCGTGTTCTCGCACGCCAGCGCGATCGCCTGA
PROTEIN sequence
Length: 1154
MSEADFQLHGIRDPRLAVHATSSLPAWVWSLDGAHILWANTIGARLFGERNAAALAEKTIGPADPHRRQAAQLAARLSPSGAPRLERLRGFGAPLGRLLTCSCARLTFADGRTGILIAAADPVGRPMPLTERLAHLVDSIAMPAMTFTPNGALAGANMAAKNFPGLFSDLTGPGFDEARNGALRNGQSILQMDSSRVTVHRVGSGDGTALVALIDAVIVPKPMPKPTPVVLPSEEIEPVRENVTEQAAQTAPVEPAPAETAAETAADISDQTTAPAEVTPVDLFESVFDESSEPEAPARTAADTEAAPQHIASEQPKPVTHADAPREEPAGHGAPVENVTRIYIDDERRKPASPIMGSGDDVSATLLEMDGPPLTPRRHPLRFMWHMDEDSRFSLGFDEFTRLIGARTAAAFGRPWGEIADALGLDPEGQVAAAVATRDTWSGIIVNWPADGAGARLPVELSGLPIYDRAGQFLGYRGFGICRDVEGMARLAAERRDDMLYSAKPPAAAQPSEPPPPNVTIPEPVNEHIVDEPASSVLPSETVHAADSVQDNFPRDSFPRAEQKPVVDTPQNVVPFPVAEPKSPALTAVESNAFDELARRLSARLDNAAESETLTDASVAELFAADGAAQPHEPVSEPPAPEHPPAFLQPEPVLPRANAAQDSQLLDRLPTGVLVYRLDRLLYANKAFLASTGYDDLHALTEAGGLDALTVEPGAGSASSTSETGTPVVIAATSKSGPDKGEPADARLFAITWDNEPAHALVFSGPRIDPVLAITPITAASDDTTQAEELGTILDNTAEGVIVFDGQGRVLSCNRSAEVLFGRDDNEMATLNLTDLFAADSQRAVQDYVNDVRTAAVTSLLNHDREMLGRARDGGVIPLSMTLGRTRPDGARFFAIFRNQSQARKSEGELVQARRQVERATNARADILGRISHEVRMPLSAIIGFADVMIDERFGALGNERYVEYMKDIRASGQRVMAIIDDLLDLSRIETGKMDLSFASQDLNSMVEQCVAVMQPQANRERIIIRTSLAHALPTVKADARALRQIALNLIGNSIHLANAGGQVIVSTATTDFGDIVLRVRDTGPGLNDNEIAAAMAPFRTTGASDQTADGSVVNLSLTKALVEANRAQFHIKTAPHSGTLIEVVFSHASAIA*