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S15_scaffold_331_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_331_curated_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..164
DNA (162bp) protein (54aa)
Putrescine transport system permease protein PotI n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QFX9_9BRAD
Putrescine transport system permease protein PotI {ECO:0000313|EMBL:EGP09921.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ABC transporter permease
S15_scaffold_331_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161..2371)
DNA (2211bp) protein (737aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF50_9BRAD">RepID=K8PF50_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37013.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_331_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2574..3275
DNA (702bp) protein (234aa)
3-oxoacid CoA-transferase, A subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P354_9BRAD rbh
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:EKS37012.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
3-ketoacid-coenzyme A transferase subunit A rbh
S15_scaffold_331_curated_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3298..3948
DNA (651bp) protein (217aa)
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B n=2 Tax=Bradyrhizobiaceae RepID=F7QFX5_9BRAD rbh
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B {ECO:0000313|EMBL:EKS35195.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
3-ketoacid-coenzyme A transferase subunit B rbh
S15_scaffold_331_curated_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4082..5152
DNA (1071bp) protein (357aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI000313EF84 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35193.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein rbh
S15_scaffold_331_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5149..6837)
DNA (1689bp) protein (563aa)
iron ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI000315F64D rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37009.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
binding-protein-dependent transport systems inner membrane component rbh
S15_scaffold_331_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6956..7981)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P349_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37007.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
extracellular solute-binding protein rbh
S15_scaffold_331_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8118..11579)
DNA (3462bp) protein (1154aa)
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P693_9BRAD rbh
PAS domain S-box protein {ECO:0000313|EMBL:EKS37006.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
PAS/PAC sensor signal transduction histidine kinase rbh
S15_scaffold_331_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11921..12295
DNA (375bp) protein (125aa)
Phasin n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBL7_9BRAD
Phasin {ECO:0000313|EMBL:EKS37005.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_331_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12495..12920
DNA (426bp) protein (142aa)
Phasin n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P886_9BRAD
Phasin {ECO:0000313|EMBL:EKS37004.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_331_curated_trna_1
unknown

Not on your lists

13125..13198
DNA (74bp)
transferRNA His
S15_scaffold_331_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13229..15640)
DNA (2412bp) protein (804aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 PF40_9BRAD">RepID=K8PF40_9BRAD rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS37003.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
diguanylate cyclase/phosphodiesterase rbh
S15_scaffold_331_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15903..16178)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P344_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37002.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S15_scaffold_331_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16440..18704
DNA (2265bp) protein (755aa)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P688_9BRAD rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKS37001.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ATPase P
S15_scaffold_331_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19156..20079)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBL3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37000.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
LysR family transcriptional regulator
S15_scaffold_331_curated_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20082..21047)
DNA (966bp) protein (322aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
trxB; thioredoxin reductase (EC:1.8.1.9) rbh
thioredoxin reductase n=1 Tax=Afipia birgiae RepID=UPI0002FD6B27 rbh
S15_scaffold_331_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21316..21798
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF37_9BRAD">RepID=K8PF37_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36998.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
AsnC family transcriptional regulator
S15_scaffold_331_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22048..22806
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P339_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36997.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
S15_scaffold_331_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22837..23247)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P685_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36996.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
LuxR family transcriptional regulator
S15_scaffold_331_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23416..23697)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBK9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36995.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S15_scaffold_331_curated_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23837..24313)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P874_9BRAD rbh
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
greA; transcription elongation factor GreA
S15_scaffold_331_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24500..27964)
DNA (3465bp) protein (1155aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5) rbh
Carbamoyl-phosphate synthase large chain n=1 Tax=Afipia broomeae ATCC 49717 PF33_9BRAD">RepID=K8PF33_9BRAD rbh
S15_scaffold_331_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28152..28847)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P335_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36992.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
type 12 methyltransferase rbh
S15_scaffold_331_curated_23
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29037..29408
DNA (372bp) protein (124aa)
Ferritin and Dps n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYA3_9BRAD
Ferritin and Dps {ECO:0000313|EMBL:EAQ35039.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ferritin
S15_scaffold_331_curated_24
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29715..31232
DNA (1518bp) protein (506aa)
sodium:proton antiporter n=1 Tax=Afipia birgiae RepID=UPI0003749B5E rbh
Na+/H+ antiporter {ECO:0000313|EMBL:EGP09893.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Na+/H+ antiporter rbh
S15_scaffold_331_curated_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31295..32485)
DNA (1191bp) protein (397aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P871_9BRAD rbh
carbamoyl phosphate synthase small subunit rbh
S15_scaffold_331_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32653..34245
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF30_9BRAD">RepID=K8PF30_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36988.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
acyl-CoA synthetase rbh
S15_scaffold_331_curated_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34391..35092
DNA (702bp) protein (234aa)
alpha/beta hydrolase n=1 Tax=Afipia birgiae RepID=UPI00037CBE08 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36987.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hydrolase
S15_scaffold_331_curated_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35165..35620
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P679_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36986.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
GatB/Yqey domain-containing protein
S15_scaffold_331_curated_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35828..37438
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBK0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36985.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
acetyl-coenzyme A synthetase rbh
Displaying items 1-30 of 40 in total

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