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S15_scaffold_32_curated

Search features with annotation key words

Displaying items 1-30 of 226 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_32_curated_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..243
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1B4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78508.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_32_curated_2
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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428..1159
DNA (732bp) protein (244aa)
Uncharacterized protein id=2062902 bin=GWE2_Bacteroidetes_42_42 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
type 11 methyltransferase
Tax=GWF2_Bacteroidetes_43_63_curated
S15_scaffold_32_curated_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1168..2847)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein id=1830182 bin=GWE2_Bacteroidetes_42_39 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
pectate lyase
Tax=GWE2_Bacteroidetes_42_39_curated
S15_scaffold_32_curated_4
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2909..4825)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9T9Y0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY65618.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
S15_scaffold_32_curated_5
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5017..6504)
DNA (1488bp) protein (496aa)
FAD dependent oxidoreductase id=1895010 bin=GWE2_Bacteroidetes_32_14 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + rbh
amine oxidase
Tax=GWE2_Bacteroidetes_32_14_curated
S15_scaffold_32_curated_6
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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6794..8065
DNA (1272bp) protein (424aa)
Secreted protein with Fibrobacter succinogenes major domain id=4518470 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
secreted protein with Fibrobacter succinogenes major domain
Tax=GWA2_Bacteroidetes_32_17_curated
S15_scaffold_32_curated_7
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8089..8718
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TPV5_MARTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR23642.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
S15_scaffold_32_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9646..10053
DNA (408bp) protein (136aa)
Thioesterase superfamily protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N7_PALPW
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADQ79681.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_32_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10123..11187
DNA (1065bp) protein (355aa)
Isochorismate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N6_PALPW
isochorismate synthase
Isochorismate synthase {ECO:0000313|EMBL:ADQ79680.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_32_curated_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11168..12850
DNA (1683bp) protein (561aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N5_PALPW rbh
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase rbh
S15_scaffold_32_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12852..13667
DNA (816bp) protein (272aa)
1,4-dihydroxy-2-naphthoate synthase (EC:4.1.3.36) rbh
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
1,4-Dihydroxy-2-naphthoate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N4_PALPW rbh
S15_scaffold_32_curated_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13671..14576
DNA (906bp) protein (302aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
1,4-dihydroxy-2-naphthoateoctaprenyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N3_PALPW rbh
1,4-dihydroxy-2-naphthoateoctaprenyltransferase rbh
S15_scaffold_32_curated_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14584..15615
DNA (1032bp) protein (344aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N2_PALPW rbh
mandelate racemase/muconate lactonizing protein rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADQ79676.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_32_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15626..16690
DNA (1065bp) protein (355aa)
AMP-dependent synthetase and ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N1_PALPW rbh
amp-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADQ79675.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_32_curated_15
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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comp(16723..18630)
DNA (1908bp) protein (636aa)
Sodium:solute symporter family protein id=1830415 bin=GWE2_Bacteroidetes_42_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good + rbh
symporter
Tax=GWF2_Bacteroidetes_43_63_curated
S15_scaffold_32_curated_16
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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comp(18627..18947)
DNA (321bp) protein (107aa)
Putative uncharacterized protein id=1830412 bin=GWE2_Bacteroidetes_42_42 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWF2_Bacteroidetes_43_63_curated
S15_scaffold_32_curated_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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19076..19642
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Leptospira kirschneri RepID=UPI0002E5F447
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
S15_scaffold_32_curated_18
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20003..21052
DNA (1050bp) protein (350aa)
Glycosidase related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7V6_PALPW rbh
glycosidase-like protein rbh
Tax=CG_Paludi_01
S15_scaffold_32_curated_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21036..23249
DNA (2214bp) protein (738aa)
Glycosyl transferase group 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7V5_PALPW rbh
group 1 glycosyl transferase rbh
Tax=CG_Paludi_01
S15_scaffold_32_curated_20
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23277..23678
DNA (402bp) protein (134aa)
Uncharacterized protein id=2505767 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG53441.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
S15_scaffold_32_curated_trna_10
unknown

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comp(23768..23851)
DNA (84bp)
transferRNA Leu
S15_scaffold_32_curated_trna_9
unknown

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comp(23864..23947)
DNA (84bp)
transferRNA Leu
S15_scaffold_32_curated_trna_8
unknown

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comp(23967..24039)
DNA (73bp)
transferRNA Gly
S15_scaffold_32_curated_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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24334..28818
DNA (4485bp) protein (1495aa)
Spore coat protein CotH id=2717668 bin=GWF2_Bacteroidetes_40_13 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
S15_scaffold_32_curated_22
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28857..30443)
DNA (1587bp) protein (529aa)
Ribonuclease, Rne/Rng family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T139_PALPW rbh
ribonuclease, rne/rng family rbh
Tax=CG_Paludi_01
S15_scaffold_32_curated_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30670..30942)
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein id=4090887 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ADQ78419.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_32_curated_24
unknown

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30973..31119
DNA (147bp) protein (49aa)

This feature has no annotations

S15_scaffold_32_curated_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31246..32331
DNA (1086bp) protein (362aa)
Hemolysin A n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Y1_PALPW rbh
hemolysin a rbh
Hemolysin A {ECO:0000313|EMBL:ADQ79075.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S15_scaffold_32_curated_26
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(32373..33482)
DNA (1110bp) protein (370aa)
Membrane-fusion protein id=3966225 bin=GWF2_Bacteroidetes_41_61 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
membrane-fusion protein
Tax=BJP_IG2069_Bacteroidetes_43_11
S15_scaffold_32_curated_27
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(33560..37900)
DNA (4341bp) protein (1447aa)
Putative silver efflux pump id=3966167 bin=GWF2_Bacteroidetes_41_61 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
silver efflux pump rbh
Tax=CG_Paludi_01
Displaying items 1-30 of 226 in total

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