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S15_scaffold_663_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_663_curated_1
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..186)
DNA (186bp) protein (62aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Acidovorax sp. CF316 RepID=J0K5N1_9BURK
Tax=GWA2_Curvibacter_64_110_curated
S15_scaffold_663_curated_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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425..2752
DNA (2328bp) protein (776aa)
malic enzyme (EC:1.1.1.40 2.3.1.8) rbh
Malic enzyme n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG36_9BURK rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S15_scaffold_663_curated_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2969..3391
DNA (423bp) protein (141aa)
guanine-specific ribonuclease N1 and T1; K01167 ribonuclease T1 [EC:3.1.27.3] id=5081360 bin=GWF1_Burkholderiales_GWF1_66_17 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
guanine-specific ribonuclease N1 and T1
Tax=BJP_08E140C01_Burkholderiales_65_30
S15_scaffold_663_curated_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3419..3976
DNA (558bp) protein (186aa)
Uncharacterized protein id=1283779 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S15_scaffold_663_curated_5
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4101..4856)
DNA (756bp) protein (252aa)
rsmA; ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182) rbh
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Variovorax paradoxus B4 RepID=T1XJ06_VARPD rbh
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
S15_scaffold_663_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4853..6220)
DNA (1368bp) protein (456aa)
Chaperone SurA n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSE0_9BURK rbh
PpiC-type peptidyl-prolyl cis-trans isomerase rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S15_scaffold_663_curated_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6213..8531)
DNA (2319bp) protein (773aa)
LPS-assembly protein LptD n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG41_9BURK rbh
organic solvent tolerance protein OstA
Tax=BJP_08E140C01_Burkholderiales_65_30
S15_scaffold_663_curated_8
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8756..9844
DNA (1089bp) protein (363aa)
Aminoglycoside phosphotransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSE2_9BURK rbh
predicted phosphotransferase related to Ser/Thr protein kinase
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
S15_scaffold_663_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9857..10570
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG43_9BURK
16S ribosomal RNA methyltransferase RsmE
S15_scaffold_663_curated_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10598..11086)
DNA (489bp) protein (163aa)
ADP-ribose pyrophosphatase n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ0_9BURK
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EJL79801.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
NUDIX hydrolase
S15_scaffold_663_curated_11
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11083..13461)
DNA (2379bp) protein (793aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-) rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI000237551F rbh
S15_scaffold_663_curated_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13470..15158)
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F2B12 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD22839.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
FecR protein rbh
S15_scaffold_663_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15121..15564)
DNA (444bp) protein (148aa)
PadR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00035E6023
response regulator receiver
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEB83499.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 13 items

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