name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S15_scaffold_278_curated_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(70..1074)
|
Uncharacterized protein UPF0065 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FY6_POLSJ
rbh
hypothetical protein
rbh
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABE42556.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
|
|
S15_scaffold_278_curated_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1217..2200)
|
Uncharacterized protein id=1270772 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
hypothetical protein
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_278_curated_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2363..3778)
|
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ20_ALIDB
rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO23615.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
rbh
|
|
S15_scaffold_278_curated_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4211..5461)
|
Phenylacetate-coenzyme A ligase id=1270771 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
phenylacetate-CoA ligase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_278_curated_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5593..6402)
|
ABC transporter related protein id=1270770 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
ABC transporter-like protein
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_278_curated_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6529..7866)
|
ABC transporter permease n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002D72FA0
rbh
putative ABC transporter, substrate-binding protein
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_278_curated_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8010..9086)
|
ABC transporter permease n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E2FF2C
rbh
inner-membrane translocator
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_278_curated_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9098..10027)
|
Putative ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XI94_VARPD
rbh
putative ABC transporter, permease protein
rbh
Putative ABC transporter, permease protein {ECO:0000313|EMBL:AGU52251.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
S15_scaffold_278_curated_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10038..10832)
|
ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQB7_9BURK
rbh
ABC transporter
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_278_curated_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10829..12775)
|
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=5080670 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
AMP-dependent synthetase and ligase
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_278_curated_11
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12944..13675
|
cAMP-binding protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CRN0_9BURK
rbh
cAMP-binding protein {ECO:0000313|EMBL:EJL76851.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
Crp/FNR family transcriptional regulator
rbh
|
|
S15_scaffold_278_curated_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13747..14673
|
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYW3_9BURK
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22409.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
rbh
|
|
S15_scaffold_278_curated_13
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14670..15290
|
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KNH6_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
|
|
S15_scaffold_278_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15304..17664
|
Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5S0_9BURK
rbh
diguanylate cyclase/phosphodiesterase
rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFU44276.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
|
|
S15_scaffold_278_curated_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17674..18696
|
Pseudouridine synthase Rsu id=1270763 bin=GWE1_Burkholderiales_65_30 species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
pseudouridine synthase Rsu
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S15_scaffold_278_curated_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18725..19744
|
Diguanylate cyclase with GAF sensor n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1Y0_VARPE
rbh
diguanylate cyclase with gaf sensor
rbh
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ADU37983.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
S15_scaffold_278_curated_17
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
19922..21505
|
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003494BC8
Uncharacterized protein {ECO:0000313|EMBL:EYT60904.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
chromosome condensation regulator RCC1
|
|
S15_scaffold_278_curated_18
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21665..23602
|
Heat shock protein Hsp90; K04079 molecular chaperone HtpG id=5080666 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
Heat shock protein Hsp90
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S15_scaffold_278_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23583..25253)
|
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W8I6_DELAC
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34520.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
glycosyltransferase
rbh
|
|
S15_scaffold_278_curated_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25296..27560
|
Cytochrome c biogenesis protein transmembrane subunit id=1300397 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
thiol-disulfide interchange protein DsbD-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S15_scaffold_278_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27583..28188
|
Periplasmic/membrane thiol peroxidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MM53_9BURK
Periplasmic/membrane thiol peroxidase {ECO:0000313|EMBL:EIK90293.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
periplasmic/membrane thiol peroxidase
|
|
S15_scaffold_278_curated_22
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28324..28827
|
CoA-binding domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9R2_9BURK
CoA-binding domain-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
|
|
S15_scaffold_278_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28832..30151
|
o-acetylhomoserine/o-acetylserine sulfhydrylase (EC:2.5.1.49)
rbh
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368280F
rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
S15_scaffold_278_curated_24
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30161..31357)
|
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
rbh
Nicotinate phosphoribosyltransferase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TKT6_ACIAC
rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
|
|
S15_scaffold_278_curated_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31381..31968)
|
Methionine biosynthesis protein MetW n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM0_9BURK
rbh
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:EIK91510.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
methionine biosynthesis protein MetW
rbh
|
|
S15_scaffold_278_curated_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31965..33233)
|
Homoserine O-acetyltransferase id=1293900 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
metX; homoserine acetyltransferase
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S15_scaffold_278_curated_27
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33402..34223
|
Putative Formate/nitrite transporter n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G278_HERAR
rbh
hypothetical protein
rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
S15_scaffold_278_curated_28
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34476..34895
|
RNA recognition motif-containing protein id=5083681 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
RNA-binding protein with RRM domain
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_278_curated_29
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34998..35792)
|
Short-chain dehydrogenase/reductase sdr n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM3_9BURK
rbh
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:EIK91513.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
short-chain dehydrogenase/reductase SDR
rbh
|
|
S15_scaffold_278_curated_30
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35789..36412)
|
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BX15_9BURK
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|