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S15_scaffold_310_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_310_curated_1
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189..914
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FV4_POLSJ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
S15_scaffold_310_curated_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(933..2261)
DNA (1329bp) protein (443aa)
Putative GAF sensor protein id=1274564 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
GAF sensor protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S15_scaffold_310_curated_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2258..2761)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYY0_9BURK
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22426.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
S15_scaffold_310_curated_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2782..5070)
DNA (2289bp) protein (763aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000362A2FC rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S15_scaffold_310_curated_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5140..6096)
DNA (957bp) protein (319aa)
Protein translocase subunit SecF id=1283671 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
secF; preprotein translocase subunit SecF rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S15_scaffold_310_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6112..8004)
DNA (1893bp) protein (631aa)
Protein translocase subunit SecD n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT53_9BURK rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
secD; preprotein translocase subunit SecD rbh
S15_scaffold_310_curated_7
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8129..8452)
DNA (324bp) protein (108aa)
Uncharacterized protein id=1283673 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Preprotein translocase subunit YajC {ECO:0000313|EMBL:EWS65625.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
protein translocase subunit yajC
S15_scaffold_310_curated_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8596..12162)
DNA (3567bp) protein (1189aa)
Indolepyruvate ferredoxin oxidoreductase subunits alpha and beta id=1283679 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
indolepyruvate ferredoxin oxidoreductase subunits alpha and beta rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S15_scaffold_310_curated_9
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12442..15348
DNA (2907bp) protein (969aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00035E167E rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV28870.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
diguanylate cyclase/phosphodiesterase with Chase sensor rbh
S15_scaffold_310_curated_10
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15370..15849
DNA (480bp) protein (160aa)
AsnC family transcriptional regulator n=1 Tax=Curvibacter lanceolatus RepID=UPI000378407A
AsnC family transcriptional regulator
Tax=GWA2_Curvibacter_64_110_curated
S15_scaffold_310_curated_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15851..16750)
DNA (900bp) protein (300aa)
hypothetical protein id=5083415 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
amidohydrolase 2 rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S15_scaffold_310_curated_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16756..17445)
DNA (690bp) protein (230aa)
Carboxymethylenebutenolidase id=1287067 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
carboxymethylenebutenolidase rbh
Tax=GWE1_Burkholderiales_65_30_curated
S15_scaffold_310_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17447..18058)
DNA (612bp) protein (204aa)
DSBA oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJB5_9BURK
DSBA oxidoreductase {ECO:0000313|EMBL:EIK89305.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
carboxymethylenebutenolidase
S15_scaffold_310_curated_14
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18146..18892
DNA (747bp) protein (249aa)
glucose-1-dehydrogenase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F6788E rbh
putative dehydrogenase/reductase rbh
Tax=GWA2_Curvibacter_64_110_curated
S15_scaffold_310_curated_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18902..19522
DNA (621bp) protein (207aa)
multiple antibiotic resistance (MarC)-like proteins; K05595 multiple antibiotic resistance protein id=5083410 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
multiple antibiotic resistance (MarC)-like protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S15_scaffold_310_curated_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19651..20646)
DNA (996bp) protein (332aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000378B64E rbh
Ketopantoate reductase {ECO:0000313|EMBL:EJE54059.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
S15_scaffold_310_curated_17
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20687..21169)
DNA (483bp) protein (161aa)
Universal stress protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XV7_RHOFD
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
S15_scaffold_310_curated_18
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21259..22881
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FK0_POLSJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE42692.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
S15_scaffold_310_curated_19
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22926..24275
DNA (1350bp) protein (450aa)
Peptidase M48 Ste24p n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZJX1_THASP rbh
peptidase M48 Ste24p rbh
Peptidase M48 Ste24p {ECO:0000313|EMBL:ACK54962.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
S15_scaffold_310_curated_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24375..25292)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRU1_9BURK rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S15_scaffold_310_curated_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25289..26272)
DNA (984bp) protein (328aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5Z9_VARPE rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADU38234.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
S15_scaffold_310_curated_22
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26269..27174)
DNA (906bp) protein (302aa)
Putative Na+-dependent transporter n=1 Tax=Acidovorax sp. CF316 RepID=J0KGF1_9BURK rbh
Putative Na+-dependent transporter {ECO:0000313|EMBL:EJE50313.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
bile acid:sodium symporter rbh
S15_scaffold_310_curated_23
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27184..28503)
DNA (1320bp) protein (440aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V601_VARPE rbh
faD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
S15_scaffold_310_curated_24
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28500..29312)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ED43_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJE50311.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
short chain dehydrogenase rbh
S15_scaffold_310_curated_25
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29415..30182
DNA (768bp) protein (256aa)
IclR family transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRT6_9BURK rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:EHL24952.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
IclR family transcriptional regulator rbh
S15_scaffold_310_curated_26
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30246..31886)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIE0_ACIET rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACM34878.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
S15_scaffold_310_curated_27
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31906..32727)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MID9_ACIET rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACM34877.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
S15_scaffold_310_curated_28
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32884..34449
DNA (1566bp) protein (522aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q1L2_ACIAP rbh
Chemotaxis protein {ECO:0000313|EMBL:KGM41993.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
methyl-accepting chemotaxis sensory transducer rbh
S15_scaffold_310_curated_29
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34466..35311)
DNA (846bp) protein (282aa)
protocatechuate 3,4-dioxygenase subunit beta n=1 Tax=Acidovorax radicis RepID=UPI0002375561 rbh
protocatechuate 4,5-dioxygenase subunit beta rbh
Tax=GWA2_Burkholderiales_64_37_curated
S15_scaffold_310_curated_30
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35327..35677)
DNA (351bp) protein (117aa)
Protocatechuate 4,5-dioxygenase subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYM6_9BURK
protocatechuate 4,5-dioxygenase subunit alpha
Tax=GWA2_Burkholderiales_64_37_curated
Displaying items 1-30 of 45 in total

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