name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S15_scaffold_106_curated_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(271..1449)
|
Major facilitator superfamily protein id=1283787 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
major facilitator superfamily protein
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_106_curated_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1569..2861
|
Uncharacterized protein id=1274530 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
hypothetical protein
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_106_curated_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2969..4870
|
Potassium transporter id=1274529 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
potassium transporter
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S15_scaffold_106_curated_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4948..5355
|
MerR family transcriptional regulator id=5080399 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
MerR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S15_scaffold_106_curated_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5365..5976)
|
Glutathione S-transferase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QL7_RHOFD
glutathione S-transferase-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S15_scaffold_106_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6134..6595
|
Phenylacetic acid degradation-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXP8_9BURK
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-like protein {ECO:0000313|EMBL:AFU47828.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
|
|
S15_scaffold_106_curated_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6614..7792
|
Isovaleryl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR44_9BURK
rbh
Isovaleryl-CoA dehydrogenase
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_106_curated_8
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7822..8481
|
carbonate dehydratase (EC:4.2.1.1)
rbh
carbonate dehydratase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002D52391
rbh
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
|
|
S15_scaffold_106_curated_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8496..10307
|
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein (EC:2.7.11.5); K00906 isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] id=5080395 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase (EC:3.1.3.-)
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_106_curated_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10349..11536
|
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] id=5080394 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
acetyl-CoA acetyltransferase
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S15_scaffold_106_curated_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11536..12204
|
short-chain dehydrogenase/reductase sdr id=5080392 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
short chain dehydrogenase
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S15_scaffold_106_curated_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12226..13353
|
Acyl-CoA dehydrogenase domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCA8_ACISJ
rbh
acyl-CoA dehydrogenase domain-containing protein
rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABM43883.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
|
|
S15_scaffold_106_curated_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13390..14778
|
trkA; NAD binding component of K+ transport system; K03499 trk system potassium uptake protein TrkA id=5080390 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
trkA; K+ transport systems, NAD-binding component
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_106_curated_14
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14793..16247
|
Trk system potassium uptake protein id=1269970 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
trkG; Trk-type K+ transport system, membrane components
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
S15_scaffold_106_curated_15
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16261..17886)
|
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375207
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJE50121.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
rbh
|
|
S15_scaffold_106_curated_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17994..18434
|
rhodanese-like protein id=5080386 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rhodanese-like protein
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S15_scaffold_106_curated_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18431..18826
|
UPF0225 protein HMPREF9701_05540 n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W6W3_DELAC
UPF0225 protein GY14_11995 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
|
|
S15_scaffold_106_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18823..19494
|
HAD family hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR54_9BURK
HAD family hydrolase {ECO:0000313|EMBL:EIK91694.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
HAD family hydrolase
|
|
S15_scaffold_106_curated_19
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19484..20518)
|
DNA-binding domain-containing protein, AraC-type n=1 Tax=Acidovorax sp. CF316 RepID=J1ECK9_9BURK
rbh
helix-turn-helix domain-containing protein
rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJE50136.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
|
|
S15_scaffold_106_curated_20
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20637..22244
|
methylcrotonoyl-CoA carboxylase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00038023B6
rbh
propionyl-CoA carboxylase
Tax=GWA2_Curvibacter_64_110_curated
|
|
S15_scaffold_106_curated_21
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22252..22761
|
Dinb family protein id=1269982 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
DinB family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S15_scaffold_106_curated_22
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22758..23543
|
Enoyl-CoA hydratase/carnithine racemase id=1269983 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
enoyl-CoA hydratase
rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S15_scaffold_106_curated_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23568..24275
|
Putative transmembrane protein id=1269984 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
putative transmembrane protein
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S15_scaffold_106_curated_24
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24276..26282
|
3-methylcrotonoyl-CoA carboxylase subunit alpha (EC:6.4.1.4)
rbh
3-methylcrotonoyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:ABE46049.1}; EC=6.4.1.4 {ECO:0000313|EMBL:ABE46049.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
3-methylcrotonoyl-CoA carboxylase, alpha subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124J3_POLSJ
rbh
|
|
S15_scaffold_106_curated_25
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26368..27306
|
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG77_ACIET
rbh
d-isomer specific 2-hydroxyacid dehydrogenase
rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ACM34472.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
|
|
S15_scaffold_106_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27327..28235
|
hydroxymethylglutaryl-CoA lyase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DF4367
rbh
hydroxymethylglutaryl-CoA lyase
rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
|
|
S15_scaffold_106_curated_27
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28276..28494
|
AbrB family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR68_9BURK
AbrB family transcriptional regulator {ECO:0000313|EMBL:EIK91708.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
AbrB family transcriptional regulator
|
|
S15_scaffold_106_curated_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28491..28919
|
PilT domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR69_9BURK
PilT domain-containing protein {ECO:0000313|EMBL:EIK91709.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PilT
|
|
S15_scaffold_106_curated_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28925..29569
|
lysine exporter protein LysE/YggA; K05834 homoserine/homoserine lactone efflux protein id=5080370 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
lysine exporter protein LysE/YggA
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S15_scaffold_106_curated_30
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29583..30080
|
YbaK/prolyl-tRNA synthetase associated region id=1269989 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=CG_Rhodof_04
|