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S15_scaffold_1071_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_1071_curated_1
CSP1_5_NC10, NC10, Bacteria

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76..1005
DNA (930bp) protein (310aa)
Outer membrane assembly lipoprotein YfiO n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P393_9BACT rbh
Tetratricopeptide TPR_2
Tax=CSP1_5_NC10
S15_scaffold_1071_curated_2
unknown

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1022..1579
DNA (558bp) protein (186aa)
Thiamine monophosphate synthase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2F8_9BACT
S15_scaffold_1071_curated_3
unknown

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1667..1930
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P429_9BACT
S15_scaffold_1071_curated_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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1933..3018
DNA (1086bp) protein (362aa)
rlmN2; ribosomal RNA large subunit methyltransferase n 2 (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NVR3_9BACT rbh
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
S15_scaffold_1071_curated_5
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3053..3643
DNA (591bp) protein (197aa)
Exopolysaccharide synthesis ExoD n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4U2_9BACT
putative ABC-type transport system, permease component
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:AFY93956.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
S15_scaffold_1071_curated_6
Neisseria shayeganii, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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3640..4440
DNA (801bp) protein (267aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1032488 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria shayeganii 871.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4U3_9BACT rbh
tRNA (guanine-N1)-methyltransferase
S15_scaffold_1071_curated_7
unknown

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4626..5144
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NY08_9BACT
S15_scaffold_1071_curated_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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5290..5649
DNA (360bp) protein (120aa)
50S ribosomal protein L19 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4U4_9BACT
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
S15_scaffold_1071_curated_9
unknown

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5765..6295
DNA (531bp) protein (177aa)

This feature has no annotations

S15_scaffold_1071_curated_10
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6390..7859)
DNA (1470bp) protein (490aa)
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4W6_9BACT rbh
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase rbh
3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative {ECO:0000313|EMBL:ABZ84503.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
S15_scaffold_1071_curated_11
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8045..8356
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4Z0_9BACT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L21
S15_scaffold_1071_curated_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists


8423..8584
DNA (162bp) protein (54aa)
50S ribosomal protein L27 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4Z1_9BACT
rpmA; 50S ribosomal protein L27
Tax=CSP1_5_NC10
Displaying 12 items

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