ggKbase home page

S15_scaffold_892_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_892_curated_1
unknown

Not on your lists

comp(5..628)
DNA (624bp) protein (208aa)

This feature has no annotations

S15_scaffold_892_curated_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

718..1176
DNA (459bp) protein (153aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rlmH; ribosomal RNA large subunit methyltransferase H (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NW44_9BACT
S15_scaffold_892_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1437..3476
DNA (2040bp) protein (680aa)
Helicase c2 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWW7_9BACT rbh
DNA helicase, Rad3 {ECO:0000313|EMBL:EIM02357.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA helicase, Rad3 rbh
S15_scaffold_892_curated_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3517..5691)
DNA (2175bp) protein (725aa)
Peptidase M56 BlaR1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKK8_9BACT
Peptidase M56 BlaR1 {ECO:0000313|EMBL:EEF59678.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
peptidase M56, BlaR1
S15_scaffold_892_curated_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5688..6071)
DNA (384bp) protein (128aa)
CopY family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U801_MYXSD
Transcriptional regulator {ECO:0000313|EMBL:KFA91618.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
CopY family transcriptional regulator
S15_scaffold_892_curated_6
unknown

Not on your lists

comp(6509..6739)
DNA (231bp) protein (77aa)

This feature has no annotations

S15_scaffold_892_curated_7
unknown

Not on your lists

comp(6782..6961)
DNA (180bp) protein (60aa)

This feature has no annotations

S15_scaffold_892_curated_8
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7734..9644
DNA (1911bp) protein (637aa)
TonB-dependent receptor n=1 Tax=Teredinibacter turnerae RepID=UPI00036495AC
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:ACR14276.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredinibacter turnerae (strain ATCC 39867 / T7901).;"
S15_scaffold_892_curated_9
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(9716..10273)
DNA (558bp) protein (186aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUR4_ROSS1
ATP--cobalamin adenosyltransferase
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ABQ90367.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Displaying 9 items

View Taxonomy