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S15_scaffold_1009_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_1009_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..157)
DNA (156bp) protein (52aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQ22_METNO
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KFC66746.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
flhA; flagellar biosynthesis protein FlhA
S15_scaffold_1009_curated_2
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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656..3112
DNA (2457bp) protein (819aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB4_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:KGE03265.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
hypothetical protein
S15_scaffold_1009_curated_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3135..3554
DNA (420bp) protein (140aa)
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZJ8_9BACT
Nucleoside diphosphate kinase {ECO:0000313|EMBL:AKF06533.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
S15_scaffold_1009_curated_4
unknown

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comp(3630..4103)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3W3_9BACT
S15_scaffold_1009_curated_5
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4103..5944)
DNA (1842bp) protein (614aa)
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01569}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01569};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01569}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF_01569};; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
Proline--tRNA ligase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3W4_9BACT rbh
prolyl-tRNA synthetase rbh
S15_scaffold_1009_curated_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(5989..6462)
DNA (474bp) protein (158aa)
GatB/YqeY family protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3W5_9BACT
GatB/Yqey domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
S15_scaffold_1009_curated_7
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

Not on your lists

6555..7016
DNA (462bp) protein (154aa)
CheC domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3W6_9BACT
CheC domain-containing protein
CheC domain protein {ECO:0000313|EMBL:ADU67247.1}; TaxID=653733 species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfurispirillum indicum (strain ATCC BAA-1389 / S5).;"
S15_scaffold_1009_curated_8

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comp(7111..7365)
DNA (255bp) protein (85aa)
NADPH--hemoprotein reductase (CysJ) {ECO:0000313|EMBL:AIF20720.1}; EC=1.8.1.2 {ECO:0000313|EMBL:AIF20720.1};; TaxID=1456543 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_92_B07.;"
Succinate dehydrogenase iron-sulfur protein n=1 Tax=uncultured marine group II euryarchaeote KM3-136-D10 RepID=B3V6E2_9EURY
hypothetical protein
S15_scaffold_1009_curated_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7499..8416
DNA (918bp) protein (306aa)
Thiamine-phosphate kinase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZ86_9BACT rbh
Thiamine monophosphate kinase {ECO:0000313|EMBL:GAN77096.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
thiamine-monophosphate kinase
S15_scaffold_1009_curated_10
unknown

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8413..8919
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZ85_9BACT
S15_scaffold_1009_curated_11
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8922..9224
DNA (303bp) protein (101aa)
Nucleoid-associated protein HolfoDRAFT_2164 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZ84_9BACT
Nucleoid-associated protein CathTA2_2618 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
yaaK; DNA binding protein
Displaying 11 items

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