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S15_scaffold_955_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_955_curated_1
Cryptococcus neoformans, Filobasidiella, Tremellales, Tremellomycetes, Basidiomycota, Fungi

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comp(1..579)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) RepID=Q5KGJ5_CRYNJ
Uncharacterized protein {ECO:0000313|EMBL:AAW43598.1}; TaxID=214684 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Tremellaceae; Filobasidiella; Filobasidiella/Cryptococcus neoformans species complex.;" source="Cryptococcus neoformans var. neoformans serotype D (strain JEC21 /; ATCC MYA-565) (Filobasidiella neoformans).;"
S15_scaffold_955_curated_2
unknown

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comp(654..1199)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2Z5_9BACT
S15_scaffold_955_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1210..1659)
DNA (450bp) protein (150aa)
Flagellar export protein FliJ n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2Z6_9BACT
flagellar export protein FliJ
Flagellar export protein FliJ {ECO:0000313|EMBL:ADB48481.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
S15_scaffold_955_curated_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1659..3023)
DNA (1365bp) protein (455aa)
type III secretion system ATPase, FliI/YscN (EC:3.6.3.14 3.6.3.15) rbh
Type III secretion system ATPase, FliI/YscN {ECO:0000313|EMBL:CBL35318.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CBL35318.1};; EC=3.6.3.15 {ECO:0000313|EMBL:CBL35318.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
ATPase, FliI/YscN family n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2Z7_9BACT rbh
S15_scaffold_955_curated_5
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3020..3751)
DNA (732bp) protein (244aa)
Flagellar assembly protein FliH/Type III secretion system HrpE n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2Z8_9BACT
flagellar assembly protein FliH/type III secretion system HrpE
Tax=RBG_16_Desulfobacca_58_9_curated
S15_scaffold_955_curated_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3760..4764)
DNA (1005bp) protein (335aa)
Flagellar motor switch protein FliG n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2Z9_9BACT rbh
fliG; flagellar motor switch protein FliG rbh
Flagellar motor switch protein FliG {ECO:0000313|EMBL:CDM65641.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
S15_scaffold_955_curated_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4768..6453)
DNA (1686bp) protein (562aa)
Flagellar M-ring protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P300_9BACT rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
flagellar m-ring protein flif
S15_scaffold_955_curated_8
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6503..6820)
DNA (318bp) protein (106aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P301_9BACT
flagellar hook-basal body complex subunit FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
S15_scaffold_955_curated_9
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6898..7317)
DNA (420bp) protein (140aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P302_9BACT
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
flagellar basal-body rod protein FlgC
S15_scaffold_955_curated_10
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7317..7733)
DNA (417bp) protein (139aa)
Flagellar basal body rod protein FlgB n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P303_9BACT
flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
S15_scaffold_955_curated_11
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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7884..8219
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P304_9BACT
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
S15_scaffold_955_curated_12
unknown

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8224..9717
DNA (1494bp) protein (498aa)
Surface antigen (D15) n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P305_9BACT
Displaying 12 items

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