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S15_scaffold_863_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_863_curated_1
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..982)
DNA (981bp) protein (327aa)
Putative family III CoA-transferase n=1 Tax=Octadecabacter antarcticus 307 RepID=M9RE79_9RHOB rbh
putative family III CoA-transferase rbh
Putative family III CoA-transferase {ECO:0000313|EMBL:AGI70063.1}; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter antarcticus 307.;"
S15_scaffold_863_curated_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1016..1501)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UYC3_TERSS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S15_scaffold_863_curated_3
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1528..2070
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003613EBA
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KJY23954.1}; TaxID=68223 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
putative proteinDPH-dependent FMN reductase
S15_scaffold_863_curated_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2113..3885
DNA (1773bp) protein (591aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Peptidase S49, protease IV n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08QC6_STIAD rbh
peptidase s49, protease iv rbh
S15_scaffold_863_curated_5
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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3892..4500
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000362023F
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
marC integral membrane family protein
S15_scaffold_863_curated_6
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4497..4982)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X341_BACMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW26871.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
S15_scaffold_863_curated_7
Corynebacterium matruchotii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4993..5544)
DNA (552bp) protein (184aa)
Ribosome maturation factor RimM n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P310_9BACT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=566549 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium matruchotii ATCC 33806.;"
rimM; Ribosome maturation factor RimM
S15_scaffold_863_curated_8
R_OP11_Gottesmanbacteria_46_9, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(5548..5805)
DNA (258bp) protein (86aa)
YlqC n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P311_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_46_9_curated
S15_scaffold_863_curated_9
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5869..6111)
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P312_9BACT
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
S15_scaffold_863_curated_10
unknown

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comp(6169..7659)
DNA (1491bp) protein (497aa)

This feature has no annotations

S15_scaffold_863_curated_11
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7670..9028)
DNA (1359bp) protein (453aa)
Signal recognition particle protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P313_9BACT rbh
signal recognition particle protein rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
S15_scaffold_863_curated_12
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9131..10726
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4D1_9BACT rbh
hypothetical protein rbh
Tax=RBG_16_Planctomycetes_64_12_curated
Displaying 12 items

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