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S15_scaffold_1753_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_1753_curated_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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145..2058
DNA (1914bp) protein (638aa)
Threonine--tRNA ligase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5R9_9BACT rbh
hypothetical protein rbh
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
S15_scaffold_1753_curated_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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2220..2717
DNA (498bp) protein (166aa)
Bacterial translation initiation factor 3 (BIF-3) n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5R8_9BACT
translation initiation factor 3 (bIF-3)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S15_scaffold_1753_curated_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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2728..2931
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5R7_9BACT
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
S15_scaffold_1753_curated_4
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3089..3436
DNA (348bp) protein (116aa)
50S ribosomal protein L20 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5R6_9BACT
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S15_scaffold_1753_curated_5
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3505..4575
DNA (1071bp) protein (357aa)
phenylalanyl-tRNA synthetase, subunit alpha (EC:6.1.1.20) rbh
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5R5_9BACT rbh
S15_scaffold_1753_curated_6
unknown

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4575..4823
DNA (249bp) protein (83aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5R4_9BACT
S15_scaffold_1753_curated_7
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4801..6492
DNA (1692bp) protein (564aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5R4_9BACT rbh
S15_scaffold_1753_curated_8
unknown

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6514..6750
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5Q8_9BACT
S15_scaffold_1753_curated_9
unknown

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6747..7106
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5Q7_9BACT
S15_scaffold_1753_curated_10
unknown

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7129..7236
DNA (108bp) protein (36aa)

This feature has no annotations

S15_scaffold_1753_curated_11
unknown

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7325..7618
DNA (294bp) protein (98aa)
Ribonuclease Y n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5Q6_9BACT
Displaying 11 items

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