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S15_scaffold_781_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_781_curated_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(1..924)
DNA (924bp) protein (308aa)
3-isopropylmalate dehydratase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYF5_9BURK rbh
hypothetical protein rbh
Tax=RBG_16_Acidobacteria_68_9_curated
S15_scaffold_781_curated_2
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

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comp(998..1336)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWB1_9BACT
Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
S15_scaffold_781_curated_3
Pseudomonas monteilii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1399..2079)
DNA (681bp) protein (227aa)
Flagella basal body P-ring formation protein FlgA n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWB0_9BACT
flagellar basal body P-ring biosynthesis protein FlgA
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1435058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas monteilii SB3101.;"
S15_scaffold_781_curated_4
unknown

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comp(2084..2176)
DNA (93bp) protein (31aa)

This feature has no annotations

S15_scaffold_781_curated_5
unknown

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2337..2474
DNA (138bp) protein (46aa)

This feature has no annotations

S15_scaffold_781_curated_6
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2908..3651)
DNA (744bp) protein (248aa)
Flagellar hook-basal body protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWA8_9BACT
flagellar basal-body rod protein FlgF
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:AJQ25933.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
S15_scaffold_781_curated_7
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3772..3975)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding protein family n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2L5_9BACT
cold shock protein
Cold shock protein {ECO:0000313|EMBL:CBH47310.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebacterium equi).;"
S15_scaffold_781_curated_8
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4148..4942)
DNA (795bp) protein (265aa)
NLP/P60 protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1F1_9BACT
cell wall-associated hydrolase
Tax=BJP_IG2102_Syntrophobacterales_60_12
S15_scaffold_781_curated_9
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(4961..7822)
DNA (2862bp) protein (954aa)
Protein-arginine deiminase (PAD) n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F3Y1_9CYAN rbh
Protein-arginine deiminase (PAD) {ECO:0000313|EMBL:EKU96180.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
S15_scaffold_781_curated_10
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7829..10816)
DNA (2988bp) protein (996aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BU33_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR20707.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein rbh
S15_scaffold_781_curated_11
unknown

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11375..12004
DNA (630bp) protein (210aa)

This feature has no annotations

S15_scaffold_781_curated_12
unknown

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comp(12010..12369)
DNA (360bp) protein (120aa)
DNA polymerase III, alpha subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3V9_9BACT
Displaying 12 items

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