name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S15_scaffold_2_curated_1
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
169..3621
|
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
recC; exodeoxyribonuclease V gamma chain RecC (EC:3.1.11.5)
rbh
exodeoxyribonuclease V subunit gamma n=1 Tax=Pseudomonas fluorescens RepID=UPI0002DA25E4
rbh
|
|
S15_scaffold_2_curated_2
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3618..7310
|
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
recB; exodeoxyribonuclease V subunit beta (EC:3.1.11.5)
rbh
Exodeoxyribonuclease V, beta subunit n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIQ5_PSEF5
rbh
|
|
S15_scaffold_2_curated_3
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7307..9388
|
recD; exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)
rbh
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIQ4_PSEF5
rbh
|
|
S15_scaffold_2_curated_4
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9397..10086
|
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIQ3_PSEF5
rbh
Protein YfiR {ECO:0000313|EMBL:BAQ72425.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
rbh
|
|
S15_scaffold_2_curated_5
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10083..11351
|
yfiN; putative diguanylate cyclase YfiN (EC:2.7.7.65)
rbh
Putative diguanylate cyclase YfiN n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RDY5_9PSED
rbh
Diguanylate cyclase (GGDEF) domain-containing protein, YfiN family {ECO:0000313|EMBL:BAQ72426.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
|
|
S15_scaffold_2_curated_6
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11357..11860
|
OmpA family lipoprotein n=2 Tax=Pseudomonas protegens RepID=Q4KIQ1_PSEF5
rbh
OmpA family lipoprotein {ECO:0000313|EMBL:BAQ78631.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
OmpA family lipoprotein
rbh
|
|
S15_scaffold_2_curated_7
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11907..12857)
|
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R0H7_9PSED
rbh
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:BAQ72429.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
|
|
S15_scaffold_2_curated_8
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13006..14532
|
mmsA2; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
rbh
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R2R6_9PSED
rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:BAQ72430.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
|
|
S15_scaffold_2_curated_9
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14543..15430
|
mmsB; 3-hydroxyisobutyrate dehydrogenase MmsB (EC:1.1.1.31)
rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
3-hydroxyisobutyrate dehydrogenase MmsB n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RA20_9PSED
rbh
|
|
S15_scaffold_2_curated_10
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15709..16227)
|
RES domain protein n=2 Tax=Pseudomonas protegens RepID=Q4KIP7_PSEF5
rbh
RES domain-containing protein {ECO:0000313|EMBL:BAQ72432.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
RES domain-containing protein
|
|
S15_scaffold_2_curated_11
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16224..16709)
|
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RDF7_9PSED
rbh
hypothetical protein
rbh
Toxin-antitoxin system antitoxin component, TIGR02293 family {ECO:0000313|EMBL:AAY96152.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_2_curated_12
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16833..17177)
|
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIP5_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY96153.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_2_curated_13
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17454..18095
|
kynB; arylformamidase (EC:3.5.1.9)
rbh
Kynurenine formamidase {ECO:0000255|HAMAP-Rule:MF_01969}; Short=KFA {ECO:0000255|HAMAP-Rule:MF_01969};; Short=KFase {ECO:0000255|HAMAP-Rule:MF_01969};; EC=3.5.1.9 {ECO:0000255|HAMAP-Rule:MF_01969};; Arylformamidase {ECO:0000255|HAMAP-Rule:MF_01969}; N-formylkynurenine formamidase {ECO:0000255|HAMAP-Rule:MF_01969}; Short=FKF {ECO:0000255|HAMAP-Rule:MF_01969};; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
Kynurenine formamidase n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=KYNB_PSEF5
rbh
|
|
S15_scaffold_2_curated_14
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18201..19052
|
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
Tryptophan 2,3-dioxygenase n=2 Tax=Pseudomonas protegens RepID=T23O_PSEF5
rbh
tryptophan 2,3-dioxygenase family protein
|
|
S15_scaffold_2_curated_15
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19274..20818
|
Transcriptional regulator, GntR family/aminotransferase, classes I and II n=2 Tax=Pseudomonas protegens RepID=Q4KIP2_PSEF5
rbh
mocR1; putative rhizopine catabolism regulatory protein MocR
rbh
Transcriptional regulator, GntR family/aminotransferase, classes I and II {ECO:0000313|EMBL:AAY96156.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_2_curated_16
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20833..22041)
|
Benzoate membrane transport protein BenE n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RDG1_9PSED
rbh
Benzoate transporter family protein {ECO:0000313|EMBL:BAQ72438.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
benE1; benzoate membrane transport protein BenE
rbh
|
|
S15_scaffold_2_curated_17
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22224..23624)
|
Aromatic amino acid transport protein AroP n=2 Tax=Pseudomonas protegens RepID=Q4KIP0_PSEF5
rbh
Aromatic amino acid transport protein AroP {ECO:0000313|EMBL:BAQ72439.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
aroP_2; aromatic amino acid transport protein AroP
|
|
S15_scaffold_2_curated_18
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23704..24726)
|
xylZ1; toluate 1,2-dioxygenase electron transfer component XylZ (EC:1.18.1.3)
rbh
Toluate 1,2-dioxygenase electron transfer component XylZ n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R2S4_9PSED
rbh
Anthranilate dioxygenase reductase {ECO:0000313|EMBL:BAQ78644.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
|
|
S15_scaffold_2_curated_19
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24745..25236)
|
antB; anthranilate 1,2-dioxygenase, small subunit (EC:1.14.12.1)
rbh
Anthranilate 1,2-dioxygenase, small subunit n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIN8_PSEF5
rbh
Anthranilate 1,2-dioxygenase, small subunit {ECO:0000313|EMBL:BAQ78645.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
|
|
S15_scaffold_2_curated_20
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25239..26627)
|
Anthranilate 1,2-dioxygenase, large subunit n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIN7_PSEF5
rbh
Anthranilate 1,2-dioxygenase, large subunit {ECO:0000313|EMBL:BAQ72442.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
antA; anthranilate 1,2-dioxygenase, large subunit
|
|
S15_scaffold_2_curated_21
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26838..27989
|
Transcriptional regulator, AraC family n=2 Tax=Pseudomonas protegens RepID=Q4KIN6_PSEF5
rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:BAQ78647.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
transcriptional regulator, AraC family
rbh
|
|
S15_scaffold_2_curated_22
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27996..28469)
|
Leucine-responsive regulatory protein Lrp n=2 Tax=Pseudomonas protegens RepID=R4R0I7_9PSED
AsnC family transcriptional regulator {ECO:0000313|EMBL:BAQ72444.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
AsnC family transcriptional regulator
|
|
S15_scaffold_2_curated_23
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28658..29908
|
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
kynureninase n=1 Tax=Pseudomonas fluorescens RepID=UPI0002F6D0DD
rbh
kynureninase
|
|
S15_scaffold_2_curated_24
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30019..31422
|
Amino acid permease, APC family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIN3_PSEF5
rbh
Amino acid permease {ECO:0000313|EMBL:BAQ72446.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
amino acid permease
|
|
S15_scaffold_2_curated_25
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31958..32329)
|
MerR family transcriptional regulator n=1 Tax=Pseudomonas fluorescens RepID=UPI000054CE49
MerR family transcriptional regulator {ECO:0000313|EMBL:BAQ72447.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
MerR family transcriptional regulator
|
|
S15_scaffold_2_curated_26
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32392..32967)
|
NAD(P)H dehydrogenase, quinone family n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R0J1_9PSED
rbh
NAD(P)H dehydrogenase {ECO:0000313|EMBL:BAQ72448.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
NAD(P)H dehydrogenase, quinone family
rbh
|
|
S15_scaffold_2_curated_27
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33024..33905)
|
Transcriptional regulator, LysR family n=2 Tax=Pseudomonas protegens RepID=R4R2T3_9PSED
rbh
transcriptional regulator, LysR family
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAY96168.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_2_curated_28
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34144..34908
|
membrane protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00030601C5
rbh
membrane protein
Putative membrane protein {ECO:0000313|EMBL:AAY96169.2}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_2_curated_29
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34918..35232)
|
Antibiotic biosynthesis monooxygenase domain protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIM8_PSEF5
antibiotic biosynthesis monooxygenase domain-containing protein
Antibiotic biosynthesis monooxygenase domain protein {ECO:0000313|EMBL:AAY96170.2}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_2_curated_30
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35436..36026
|
Modulator of drug activity B n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RDH3_9PSED
rbh
NAD(P)H quinone dehydrogenase MdaB {ECO:0000313|EMBL:BAQ72453.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
mdaB; modulator of drug activity B
rbh
|