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S15_scaffold_161_curated

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Displaying items 1-30 of 103 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_161_curated_1
Pseudomonas mediterranea, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..103
DNA (102bp) protein (34aa)
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Pseudomonas sp. HYS RepID=UPI00029AC0AC
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1348058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mediterranea CFBP 5447.;"
S15_scaffold_161_curated_2
Pseudomonas sp. UW4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


244..555
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=91 Tax=Pseudomonas RepID=RS10_PSEF5
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1207075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. UW4.;"
S15_scaffold_161_curated_3
Pseudomonas sp. GM17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


636..1271
DNA (636bp) protein (212aa)
50S ribosomal protein L3 n=7 Tax=Pseudomonas RepID=RL3_PSEF5 rbh
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1144323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;"
S15_scaffold_161_curated_4
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1284..1886
DNA (603bp) protein (201aa)
50S ribosomal protein L4 n=6 Tax=Pseudomonas RepID=RL4_PSEF5 rbh
rplD; 50S ribosomal protein L4 rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
S15_scaffold_161_curated_5
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1883..2182
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=101 Tax=Pseudomonas RepID=RL23_PSEF5
LSU ribosomal protein L23p (L23Ae)
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=994484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicacearum (strain NFM421).;"
S15_scaffold_161_curated_6
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2197..3021
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=2 Tax=Pseudomonas protegens RepID=RL2_PSEF5 rbh
rplB; 50S ribosomal protein L2 rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
S15_scaffold_161_curated_7
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3038..3313
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=82 Tax=Pseudomonas RepID=RS19_PSE14
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=629259 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. morsprunorum str. M302280.;"
S15_scaffold_161_curated_8
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3324..3659
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=213 Tax=Pseudomonas RepID=RL22_PSEA7
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_161_curated_9
Pseudomonas sp. CMAA1215, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3673..4359
DNA (687bp) protein (229aa)
30S ribosomal protein S3 n=7 Tax=Pseudomonas RepID=RS3_PSEF5 rbh
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1387231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CMAA1215.;"
S15_scaffold_161_curated_10
Pseudomonas sp. GM74, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4372..4785
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=21 Tax=Pseudomonas RepID=RL16_PSEF5
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1144336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM74.;"
S15_scaffold_161_curated_11
Pseudomonas savastanoi, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4785..4976
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=131 Tax=Pseudomonas RepID=RL29_PSEE4
rpmC; protein RpmC
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=875329 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas savastanoi pv. glycinea str. B076.;"
S15_scaffold_161_curated_12
Pseudomonas sp. W15Feb9B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4979..5245
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=21 Tax=Pseudomonas RepID=RS17_PSEF5
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000313|EMBL:KIK83052.1}; TaxID=550743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. W15Feb9B.;"
S15_scaffold_161_curated_13
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5269..5637
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=130 Tax=Pseudomonas RepID=RL14_PSE14
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1104682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. actinidiae ICMP 18804.;"
S15_scaffold_161_curated_14
Pseudomonas sp. GM50, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5649..5963
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=8 Tax=Pseudomonas RepID=G8Q056_PSEFL
rplX; protein RplX
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1144332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM50.;"
S15_scaffold_161_curated_15
Pseudomonas sp. RIT288, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5984..6523
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=19 Tax=Pseudomonas RepID=RL5_PSEF5 rbh
rplE; 50S ribosomal protein L5 rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1470589 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT288.;"
S15_scaffold_161_curated_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6537..6842
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=10 Tax=Pseudomonas RepID=RS14_PSEF5
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=743713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens R124.;"
S15_scaffold_161_curated_17
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7050..7442
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=3 Tax=Pseudomonas RepID=RS8_PSEF5
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_161_curated_18
Pseudomonas sp. GM60, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7455..7988
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=23 Tax=Pseudomonas RepID=RL6_PSEFS rbh
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1144334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM60.;"
S15_scaffold_161_curated_19
Pseudomonas sp. Ag1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7999..8349
DNA (351bp) protein (117aa)
50S ribosomal protein L18 n=47 Tax=Pseudomonas RepID=RL18_PSEF5
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Ag1.;"
S15_scaffold_161_curated_20
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8353..8853
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=6 Tax=Pseudomonas RepID=RS5_PSEF5 rbh
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_161_curated_21
Pseudomonas sp. GM74, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8856..9032
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=38 Tax=Pseudomonadaceae RepID=RL30_PSEF5
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1144336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM74.;"
S15_scaffold_161_curated_22
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9036..9470
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=7 Tax=Pseudomonas RepID=RL15_PSEF5
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
S15_scaffold_161_curated_23
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9471..10799
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY n=5 Tax=Pseudomonas RepID=I4Y0Z4_9PSED rbh
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
S15_scaffold_161_curated_24
Pseudomonas moraviensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11071..11427
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=9 Tax=Pseudomonas RepID=RS13_PSEF5
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1395516 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas moraviensis R28-S.;"
S15_scaffold_161_curated_25
Pseudomonas sp. GM17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11458..11847
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=10 Tax=Pseudomonas RepID=RS11_PSEF5
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1144323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;"
S15_scaffold_161_curated_26
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11866..12486
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=3 Tax=Pseudomonas RepID=RS4_PSEF5 rbh
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
S15_scaffold_161_curated_27
Pseudomonas sp. GM74, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12509..13510
DNA (1002bp) protein (334aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1144336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM74.;"
DNA-directed RNA polymerase subunit alpha n=13 Tax=Pseudomonas RepID=RPOA_PSEF5 rbh
S15_scaffold_161_curated_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13553..13939
DNA (387bp) protein (129aa)
50S ribosomal protein L17 n=7 Tax=Pseudomonas RepID=RL17_PSEF5
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK44.;"
S15_scaffold_161_curated_29
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14116..15564
DNA (1449bp) protein (483aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
catalase n=1 Tax=Pseudomonas fluorescens RepID=UPI0003016520 rbh
katA; catalase KatA
S15_scaffold_161_curated_30
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15720..16184
DNA (465bp) protein (155aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
Bacterioferritin n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4K560_PSEF5 rbh
bacterioferritin
Displaying items 1-30 of 103 in total

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