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S15_scaffold_145_curated

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_145_curated_1
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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118..1548
DNA (1431bp) protein (477aa)
General secretion pathway protein E n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R8D7_9PSED rbh
General secretion pathway protein GspE {ECO:0000313|EMBL:BAQ81287.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
pulE1; general secretion pathway protein E rbh
S15_scaffold_145_curated_2
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1548..2759
DNA (1212bp) protein (404aa)
General secretion pathway protein F n=2 Tax=Pseudomonas protegens RepID=Q4KD18_PSEF5 rbh
General secretion pathway protein GspF {ECO:0000313|EMBL:BAQ74988.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
outF; general secretion pathway protein F rbh
S15_scaffold_145_curated_3
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3292..4449
DNA (1158bp) protein (386aa)
Alkaline phosphatase n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZQ42_9PSED rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
phosphate-binding protein rbh
S15_scaffold_145_curated_4
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4601..5761
DNA (1161bp) protein (387aa)
Putative alkaline phosphatase n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3K8K1_PSEFS
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
putative alkaline phosphatase
S15_scaffold_145_curated_5
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5954..18334
DNA (12381bp) protein (4127aa)
Hemagluttinin repeat protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R5Y3_9PSED rbh
Hemagglutinin family protein {ECO:0000313|EMBL:BAQ74986.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hemagglutinin family protein
S15_scaffold_145_curated_6
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18440..18892)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZLZ1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:BAQ74982.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
S15_scaffold_145_curated_7
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18983..20188)
DNA (1206bp) protein (402aa)
MFS transporter n=1 Tax=Pseudomonas fluorescens RepID=UPI0002F5DAAF rbh
major facilitator family transporter
Transporter, major facilitator family {ECO:0000313|EMBL:AAY92036.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_145_curated_8
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20313..21236
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KD12_PSEF5 rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAY92037.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_145_curated_9
Pseudomonas sp. GM18, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21506..22759
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM18 RepID=J2NRV7_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM13479.1}; TaxID=1144324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM18.;"
S15_scaffold_145_curated_10
unknown

Not on your lists

22756..22854
DNA (99bp) protein (33aa)

This feature has no annotations

S15_scaffold_145_curated_trna_1
unknown

Not on your lists

comp(22888..22959)
DNA (72bp)
transferRNA Gln
S15_scaffold_145_curated_11
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23129..23833)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=Q4KD11_PSEF5 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ81274.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein
S15_scaffold_145_curated_12
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24010..25605
DNA (1596bp) protein (532aa)
FAD linked oxidase domain protein n=2 Tax=Pseudomonas protegens RepID=Q4KD10_PSEF5 rbh
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:BAQ74978.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
FAD linked oxidase domain-containing protein rbh
S15_scaffold_145_curated_13
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25610..27205
DNA (1596bp) protein (532aa)
glpD1; aerobic glycerol-3-phosphate dehydrogenase GlpD (EC:1.1.5.3) rbh
Aerobic glycerol-3-phosphate dehydrogenase GlpD n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R8E5_9PSED rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:BAQ74977.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
S15_scaffold_145_curated_14
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27226..28800
DNA (1575bp) protein (525aa)
Carbohydrate kinase, FGGY family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KD08_PSEF5 rbh
Carbohydrate kinase, FGGY family {ECO:0000313|EMBL:AAY92041.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
FGGY family carbohydrate kinase rbh
S15_scaffold_145_curated_15
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28929..29432
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=R4RJQ6_9PSED
Uncharacterized protein {ECO:0000313|EMBL:BAQ74975.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
S15_scaffold_145_curated_16
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29429..29677
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Pseudomonas mandelii RepID=UPI00029A970D
Uncharacterized protein {ECO:0000313|EMBL:BAQ74974.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
S15_scaffold_145_curated_17
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29832..31958
DNA (2127bp) protein (709aa)
TonB-dependent outermembrane receptor n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KD05_PSEF5 rbh
TonB-dependent outermembrane receptor {ECO:0000313|EMBL:BAQ74973.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
TonB-dependent outermembrane receptor
S15_scaffold_145_curated_18
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32043..32192)
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=Q4KD04_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY92045.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_145_curated_19
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32340..32837)
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=R4RFX0_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ81266.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein rbh
S15_scaffold_145_curated_20
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33056..34369
DNA (1314bp) protein (438aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6AGJ6_PSEVI rbh
Sensory box protein/methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAQ81265.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
sensory box protein/methyl-accepting chemotaxis protein
S15_scaffold_145_curated_21
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34474..36186)
DNA (1713bp) protein (571aa)
amidase n=1 Tax=Pseudomonas fluorescens RepID=UPI0002EA0698 rbh
Amidase {ECO:0000313|EMBL:BAQ81264.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
amidase
S15_scaffold_145_curated_22
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36334..36924)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI000314AF71
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY92051.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_145_curated_23
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37257..38831
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002EB9B7B rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ81261.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
diguanylate cyclase
S15_scaffold_145_curated_24
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38916..39281
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=Q4KCZ6_PSEF5
Uncharacterized protein {ECO:0000313|EMBL:BAQ74966.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
S15_scaffold_145_curated_25
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39484..41742)
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KCZ4_PSEF5 rbh
Uncharacterized protein {ECO:0000313|EMBL:AAY92055.2}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
hypothetical protein rbh
S15_scaffold_145_curated_26
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41891..42280
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RJD7_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ74964.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
S15_scaffold_145_curated_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42473..43471)
DNA (999bp) protein (333aa)
NADPH:quinone oxidoreductase n=1 Tax=Pseudomonas fluorescens RepID=UPI0002EC130C rbh
molecular chaperone GroES rbh
Predicted zinc-binding oxidoreductase {ECO:0000313|EMBL:AAX56379.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
S15_scaffold_145_curated_28
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43538..43768)
DNA (231bp) protein (77aa)
Hydrolase, alpha/beta fold family n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R8H6_9PSED
hydrolase, alpha/beta fold family
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:AAY92076.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_145_curated_29
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43844..44632)
DNA (789bp) protein (263aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RFZ8_9PSED rbh
Short chain dehydrogenase/reductase family oxidoreductase {ECO:0000313|EMBL:BAQ74961.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
oxidoreductase, short chain dehydrogenase/reductase family rbh
Displaying items 1-30 of 90 in total

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