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S15_scaffold_116_curated_2

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2330..4585)

Top 3 Functional Annotations

Value Algorithm Source
rpfC1; sensory/regulatory protein RpfC (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 751.0
  • Bit_score: 1390
  • Evalue 0.0
  • rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 751.0
  • Bit_score: 1378
  • Evalue 0.0
Sensory/regulatory protein RpfC n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R8A5_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 751.0
  • Bit_score: 1390
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2256
ATGATCTCCCTGCGTTCCGCCGGCCTGTTGCGCCGCTTGCTGCTGTTTATCTTGCTGTTCAGCCTGTGCTTCACCGTGCTCGCCAGCAGCGTGCAGCTGTACTTCGAATACCGCCGGGAAATGCGCGAGATCGACAGCCGCATGGAGCTGATCCGCGCCGGTTATCTGGGCAGCCTGGAACGCAACCTGTGGGACCTCAACCAGGAGCAACTGACCGTGCAGTTGCAGGGGCTGGTGGATTTTTCCGACGTGGCCCGGGTGCACCTGATCAGCAACGATTTCGACTTGCAGCAGGGCAGCGCCGAGCTGATCGGGCCGTTGCGGGTCGAGCGTTTTCCCTTGAGCTATCAACCGCCGTCCGGGCCCTTGCGCCAGTTGGGCGAGTTGCAGGTCAGCACCGATCTTGGGGCGGTGTATCGGCGCCTGTACGCCACCGGGCTGGCCAGCCTGTTGTGGATGAGCGTGTTTCTCTGCGGGCTGGCGGTGGCCTTGTCCGGGCTGTTCTACCGTCTGGTGACCCGGCACCTGCAGGTGATGGCCGATTTCGCCCGGCGCGTGGCGGCCGGCGAGCTGCACGAGCCCCTGCACCTGGACAAGCGCCAGCGCCCCGGCGGCGACGAGATCGACACCGTAGCCCGGGCCCTGGACGACATGCGCCGGGCAGTGCTCGACGACGTGCAGCGCCGCGAAGCCGACCGATTGGCCTTGCAGGACAAGCGCGACGAATTGCAGAAAATGGTCCAGCGCCGCACCGCCAGCCTGATGCACGCCAAGGACGAGGCCGAAGCCGCCAACCTCGCCAAGTCGCGCTTTCTGGCGACCATGAGCCATGAACTGCGCACCCCGTTGAACGGCATCCTCGGCATGGCCGAACTGCTGCGCCAGGCGCCCCTGGACCAGCAGGACCGCCAGCGCTTGCAGGCCTTGCATCAGGCCGGGGAGGGCTTGCTGAGCATCCTCAACGAAGTGCTGTCCTTTGCTCGGTTGGAAGAGGGCGAAAGCCGCCCGGAACTGCGCGACTTCTCCCTGCGTCAATTGCTGGAAGAAGTCACCACCTTGTTGCAGCCCCGGGCCGAGGCCAACCGCACCCGCCTGGAATTGCACATTGACGAACAACTGGCGCCGCGTCAGCAGGGCGCCGAGCAGTACCTGCGCCAGGTGCTGAGCAACCTGCTGGCCAACGCCATTCGTTTTACCGAAGACGGCTGGGTGCGGGTCGAAGTGCAAGTGCTCGGCAGCACCGCCGAGGGCCAGCGCCTGCGCTGCTGCGTGCGCGACAACGGCATCGGCATTGCCGCGTCGATGCGCGAGAAGATCTTCGAGCGTTTCGTCCAGGCCAGTGACGAGGTGACCCGGCGCTATGGCGGCACCGGCCTGGGATTGGCCATCTGCAAGCATCTGCTGCAGCAACTGGACGGACGCATCGGCGTCGACAGCGAGCTGGGGCAGGGCAGTTGTTTCTGGTTCGAGCTGGCGTTGGGCATCGGCCAGGAGCCCTTGTCGGTGCCCGCACTTGAGTTGCCGACTCAGGCTTTGAAAATCCTGGTGGTGGAAGACGTGGCCCTGAACCGCGAAGTGGCCAGCGGCCTGCTTGAGCGTGACGGCCATCAGGTGTGGCTGGCGCAAGACGGTGAAAGTGCCCTGGCCCTGTGTCAGCAGCAAGCCTTCGACCTGTTGCTGCTGGATGTGCACTTGCCGGGCATCAGCGGGGTCGAGCTGTGCCGCGAGATCCGCCAGCGTCCCGGGCCCAACCGGCAGGTGCGCATTGTCGCCCTGACCGCCAGCGTCCAGCCGTCCGTGGTGCGCGGTTATCTGCAGGCCGGGATGCAAGGCATTCTTGGCAAGCCGTTGCAGCTGGAGAGCCTGCGGCAGGTGCTGGCCGGGCAGGCGCAGTTGCCGCAGGCCGACACAGAGGAGGGCTTGCTCGACCAGGGCTTGCTGGACACCCATCGCAGCCTGTTGGGCGAGCAGAAATTGCACAGCCTGCTTCAAGTCCTGGCCGATGCCCTGGATCAGCAACTGCCCCTGCTGACCGATGCTCTGGCCGCCGAAGACTGCACCGAAGTCCAGCACCTGGCCCATCGCCTGGCGGGCAGCGCCGATTCCCTGGGCTTCTGCGCCCTGGCCCGGGTGTTGCGGGAAGTGGAGGAGGCGGCGCAGCAGACGGATCGCCCGGCGCTGACGGCCCTGGCGGCGCGCCTGCATCCGTCCTGGCAGCAGTCCCGCACCTTGCTGCACCAGCTGTTGGCGGCCTGA
PROTEIN sequence
Length: 752
MISLRSAGLLRRLLLFILLFSLCFTVLASSVQLYFEYRREMREIDSRMELIRAGYLGSLERNLWDLNQEQLTVQLQGLVDFSDVARVHLISNDFDLQQGSAELIGPLRVERFPLSYQPPSGPLRQLGELQVSTDLGAVYRRLYATGLASLLWMSVFLCGLAVALSGLFYRLVTRHLQVMADFARRVAAGELHEPLHLDKRQRPGGDEIDTVARALDDMRRAVLDDVQRREADRLALQDKRDELQKMVQRRTASLMHAKDEAEAANLAKSRFLATMSHELRTPLNGILGMAELLRQAPLDQQDRQRLQALHQAGEGLLSILNEVLSFARLEEGESRPELRDFSLRQLLEEVTTLLQPRAEANRTRLELHIDEQLAPRQQGAEQYLRQVLSNLLANAIRFTEDGWVRVEVQVLGSTAEGQRLRCCVRDNGIGIAASMREKIFERFVQASDEVTRRYGGTGLGLAICKHLLQQLDGRIGVDSELGQGSCFWFELALGIGQEPLSVPALELPTQALKILVVEDVALNREVASGLLERDGHQVWLAQDGESALALCQQQAFDLLLLDVHLPGISGVELCREIRQRPGPNRQVRIVALTASVQPSVVRGYLQAGMQGILGKPLQLESLRQVLAGQAQLPQADTEEGLLDQGLLDTHRSLLGEQKLHSLLQVLADALDQQLPLLTDALAAEDCTEVQHLAHRLAGSADSLGFCALARVLREVEEAAQQTDRPALTALAARLHPSWQQSRTLLHQLLAA*