name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S15_scaffold_116_curated_1
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(718..2121)
|
amino acid permease n=1 Tax=Pseudomonas fluorescens RepID=UPI000379ABC5
rbh
AAT family amino acid transporter {ECO:0000313|EMBL:BAQ74399.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
AAT family amino acid transporter
rbh
|
|
S15_scaffold_116_curated_2
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2330..4585)
|
rpfC1; sensory/regulatory protein RpfC (EC:2.7.13.3)
rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
Sensory/regulatory protein RpfC n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R8A5_9PSED
rbh
|
|
S15_scaffold_116_curated_3
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4582..5364)
|
amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00031707EB
rbh
Periplasmic amino acid-binding protein-like protein {ECO:0000313|EMBL:BAQ80708.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
periplasmic amino acid-binding protein-like protein
|
|
S15_scaffold_116_curated_4
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5381..6097)
|
Chemotaxis protein CheY n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZSV9_9PSED
rbh
DNA-binding response regulator {ECO:0000313|EMBL:BAQ80707.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
arcA1; aerobic respiration control protein ArcA
rbh
|
|
S15_scaffold_116_curated_5
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6180..6818)
|
Transcriptional regulator, TetR family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KD70_PSEF5
rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:BAQ80706.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
TetR family transcriptional regulator
|
|
S15_scaffold_116_curated_6
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7286..8080)
|
Putative aldolase class 2 protein CC n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RFR1_9PSED
rbh
putative aldolase class 2 protein CC
rbh
Class II aldolase and adducin N-terminal domain protein {ECO:0000313|EMBL:AAY91978.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_116_curated_7
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8180..9253)
|
Extracellular solute-binding protein, PotD/PotF family n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R8A3_9PSED
rbh
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAQ80704.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
|
|
S15_scaffold_116_curated_8
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9468..11420
|
NADH oxidase (EC:1.-.-.-)
rbh
oxidoreductase n=1 Tax=Pseudomonas fluorescens RepID=UPI0002E565B1
rbh
Oxidoreductase, FAD/FMN-binding/pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AAY91976.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_116_curated_9
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11494..12126
|
DNA-binding protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RJK0_9PSED
rbh
DNA-binding protein {ECO:0000313|EMBL:BAQ80702.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
DNA-binding protein
|
|
S15_scaffold_116_curated_10
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12177..12314)
|
Uncharacterized protein {ECO:0000313|EMBL:BAQ80701.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
|
|
S15_scaffold_116_curated_11
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12280..13110)
|
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0003741DBB
rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ80700.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein
|
|
S15_scaffold_116_curated_12
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14829..15383)
|
Exonuclease, RNase T and DNA polymerase III n=1 Tax=Halomonas sp. HAL1 RepID=G4F2X8_9GAMM
rbh
Exonuclease, RNase T and DNA polymerase III {ECO:0000313|EMBL:EHA16831.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
Exonuclease RNase T and DNA polymerase III
|
|
S15_scaffold_116_curated_13
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15412..16308)
|
AAA family ATPase n=1 Tax=Salmonella enterica subsp. enterica serovar Kentucky str. ATCC 9263 RepID=V1ZL60_SALET
rbh
ATPase central domain-containing protein {ECO:0000313|EMBL:EHA16832.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
AAA ATPase central domain protein
|
|
S15_scaffold_116_curated_14
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16305..16784)
|
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Kentucky str. ATCC 9263 RepID=V1YS98_SALET
Uncharacterized protein {ECO:0000313|EMBL:EHA16833.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
hypothetical protein
|
|
S15_scaffold_116_curated_15
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16790..17737)
|
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Kentucky str. ATCC 9263 RepID=V1YNX6_SALET
rbh
Whole genome shotgun sequence {ECO:0000313|EMBL:KIT25094.1}; TaxID=1288782 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio parahaemolyticus VP766.;"
hypothetical protein
|
|
S15_scaffold_116_curated_16
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17788..19344)
|
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Kentucky str. ATCC 9263 RepID=V1YK26_SALET
rbh
Purine phosphorylase family 1 {ECO:0000313|EMBL:EHA16835.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
hypothetical protein
|
|
S15_scaffold_116_curated_17
unknown
|
Not on your lists |
comp(19573..20334)
|
This feature has no annotations |
|
S15_scaffold_116_curated_18
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20506..20787)
|
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R899_9PSED
Uncharacterized protein {ECO:0000313|EMBL:BAQ74387.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
|
|
S15_scaffold_116_curated_19
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21039..21746
|
Phytanoyl-CoA dioxygenase, PhyH family n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R5T3_9PSED
rbh
phytanoyl-CoA dioxygenase, PhyH family
Phytanoyl-CoA dioxygenase, PhyH family {ECO:0000313|EMBL:BAQ80692.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
|
|
S15_scaffold_116_curated_20
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21793..21981)
|
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI000308AB1F
hypothetical protein
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:BAQ80691.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
|
|
S15_scaffold_116_curated_21
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21984..22247)
|
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KD76_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY91973.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_116_curated_22
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22475..22903
|
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=Q4KD80_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY91969.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_116_curated_23
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23022..25202)
|
Catalase-peroxidase {ECO:0000255|HAMAP-Rule:MF_01961}; Short=CP {ECO:0000255|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000255|HAMAP-Rule:MF_01961};; Peroxidase/catalase {ECO:0000255|HAMAP-Rule:MF_01961}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
katG; catalase/peroxidase HPI (EC:1.11.1.6)
rbh
Catalase-peroxidase n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=KATG_PSEF5
rbh
|
|
S15_scaffold_116_curated_24
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25458..26030)
|
Metal-dependent phosphohydrolase n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RJJ1_9PSED
rbh
metal-dependent phosphohydrolase
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:BAQ74373.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
|
|
S15_scaffold_116_curated_25
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26157..26765)
|
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RFP8_9PSED
rbh
hypothetical protein
rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:BAQ74372.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
|
|
S15_scaffold_116_curated_26
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26904..27245
|
protein-tyrosine phosphatase n=1 Tax=Pseudomonas fluorescens RepID=UPI00031AA899
Phosphatase {ECO:0000313|EMBL:BAQ80677.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein
|
|
S15_scaffold_116_curated_27
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27385..28581)
|
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R5S3_9PSED
rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ80675.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein
|
|
S15_scaffold_116_curated_28
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28815..29429
|
Alpha/beta hydrolase fold protein n=1 Tax=Pseudomonas sp. CFII68 RepID=S6I9T6_9PSED
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:BAQ74369.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
alpha beta hydrolase fold protein
|
|
S15_scaffold_116_curated_29
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29681..30268
|
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00031543EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY91957.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
S15_scaffold_116_curated_30
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30509..31129
|
Putative amino acid efflux protein, LysE family n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3KEA3_PSEPF
rbh
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:BAQ80672.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
lysine exporter protein LysE/YggA
rbh
|