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S15_scaffold_34_curated_20

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(21927..22601)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator protein CzcR n=2 Tax=Pseudomonas protegens RepID=R4RCH1_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 224.0
  • Bit_score: 429
  • Evalue 1.50e-117
  • rbh
Two component heavy metal response transcriptional regulator {ECO:0000313|EMBL:BAQ83079.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 224.0
  • Bit_score: 432
  • Evalue 2.40e-118
czcR5; transcriptional activator protein CzcR similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 224.0
  • Bit_score: 429
  • Evalue 4.10e-118
  • rbh

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCGTATCCTGGTTATCGAAGACGAACTTAAAACTGCCGACTACCTGCATCAGGGACTGACTGAAAGTGGATATGTGGTGGATTGTGCCAATACCGGCGCGGATGGCCTGCACCTGACCCGCCAGCACGCCTACGACCTGGTGATCCTGGACGTCAACCTGCCGCAGATCGACGGCTGGGGCGTGCTGTGCCAGATCCGCCAGGACAGCAACACCCGGGTAATGATGCTCACGGCCCAGGGACGGCTGGCGGACAAGATCCGAGGACTGGACCTGGGGGCCGATGACTACCTGGTCAAGCCGTTCGAGTTCCCCGAACTGCTGGCCCGGGTCCGCACCCTGATGCGCCGCAGCGAACAGGCAGCGGTGCCCGACGTACTCAGGGTCGCCGACCTGGAACTGGACCAGGGCCGGCACCGGGCCTTTCGCGGTAAACAACGCATCGACCTGACCACCAAGGAATTCGCCCTGCTGCACCTGCTGATGCGTCAGAGCGGCGTAGTGCTGTCCCGGACCCAGATCATCTCCTTTGTCTGGGACATGAACTTCGATTGCGACACCAACGTGGTGGAAGTCTCGATCCGTCGCTTGCGAGCGAAGATCGACGACCCTTTCGAGCGCAAACTGATCCACACCCTGCGGGGCGTGGGCTACGTACTCGAAGAGCGCGACTGA
PROTEIN sequence
Length: 225
MRILVIEDELKTADYLHQGLTESGYVVDCANTGADGLHLTRQHAYDLVILDVNLPQIDGWGVLCQIRQDSNTRVMMLTAQGRLADKIRGLDLGADDYLVKPFEFPELLARVRTLMRRSEQAAVPDVLRVADLELDQGRHRAFRGKQRIDLTTKEFALLHLLMRQSGVVLSRTQIISFVWDMNFDCDTNVVEVSIRRLRAKIDDPFERKLIHTLRGVGYVLEERD*