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S15_scaffold_34_curated

Search features with annotation key words

Displaying items 1-30 of 317 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S15_scaffold_34_curated_1
unknown

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)

This feature has no annotations

S15_scaffold_34_curated_2
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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176..835
DNA (660bp) protein (220aa)
PqiA family protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RRN3_9PSED rbh
paraquat-inducible protein A
Paraquat-inducible protein A {ECO:0000313|EMBL:BAQ76909.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
S15_scaffold_34_curated_3
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

822..1445
DNA (624bp) protein (208aa)
Paraquat-inducible protein A n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RMS2_9PSED rbh
PqiA family protein {ECO:0000313|EMBL:BAQ76908.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
pqiA2; paraquat-inducible protein A rbh
S15_scaffold_34_curated_4
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1438..3741
DNA (2304bp) protein (768aa)
PqiB family protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4K614_PSEF5 rbh
Paraquat-inducible protein B-like protein {ECO:0000313|EMBL:BAQ83098.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
PqiB family protein rbh
S15_scaffold_34_curated_5
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3898..6741)
DNA (2844bp) protein (948aa)
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RCI6_9PSED rbh
Chromosome segregation ATPase {ECO:0000313|EMBL:BAQ83097.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein rbh
S15_scaffold_34_curated_6
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6738..7445)
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=Q4K616_PSEF5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAY94459.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_34_curated_7
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7435..8712)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4K617_PSEF5 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ76904.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein rbh
S15_scaffold_34_curated_8
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8892..9689
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4K618_PSEF5 rbh
Protein TonB {ECO:0000313|EMBL:BAQ83094.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein rbh
S15_scaffold_34_curated_9
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9686..10138
DNA (453bp) protein (151aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AAY94456.2}; EC=2.3.1.128 {ECO:0000313|EMBL:AAY94456.2};; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
Ribosomal-protein-alanine acetyltransferase n=2 Tax=Pseudomonas protegens RepID=Q4K619_PSEF5 rbh
ribosomal-protein-alanine acetyltransferase
S15_scaffold_34_curated_10
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10278..10610)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=Q4K620_PSEF5
Uncharacterized protein {ECO:0000313|EMBL:BAQ76900.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
S15_scaffold_34_curated_11
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10763..11407
DNA (645bp) protein (215aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
cah_3; carbonate dehydratase (EC:4.2.1.1) rbh
Carbonic anhydrase n=1 Tax=Pseudomonas sp. CF161 RepID=S6K918_9PSED rbh
S15_scaffold_34_curated_12
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11454..12626)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RRM8_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ76898.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein rbh
S15_scaffold_34_curated_13
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12703..14334)
DNA (1632bp) protein (544aa)
molecular chaperone DnaJ n=1 Tax=Pseudomonas mandelii RepID=UPI00029A9B36 rbh
DnaJ domain-containing protein {ECO:0000313|EMBL:BAQ76897.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
heat shock protein DnaJ-like
S15_scaffold_34_curated_14
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14346..16043)
DNA (1698bp) protein (566aa)
Chaperone protein HscC n=2 Tax=Pseudomonas protegens RepID=Q4K624_PSEF5 rbh
Chaperone protein HscC {ECO:0000313|EMBL:BAQ83087.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
chaperone protein HscC
S15_scaffold_34_curated_15
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16236..17936)
DNA (1701bp) protein (567aa)
Phosphoesterase family protein PlcB n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RCH9_9PSED rbh
Acid phosphatase AcpA {ECO:0000313|EMBL:BAQ76895.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
plcB; phosphoesterase family protein PlcB rbh
S15_scaffold_34_curated_16
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18132..19550)
DNA (1419bp) protein (473aa)
Putative short-chain fatty acid transporter n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4K626_PSEF5 rbh
short-chain fatty acid transporter rbh
Putative short-chain fatty acid transporter {ECO:0000313|EMBL:AAY94449.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_34_curated_17
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19665..19922
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4K627_PSEF5
Uncharacterized protein {ECO:0000313|EMBL:BAQ83084.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
hypothetical protein
S15_scaffold_34_curated_18
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19993..21312
DNA (1320bp) protein (440aa)
Transporter, major facilitator family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4K630_PSEF5 rbh
Major facilitator family transporter {ECO:0000313|EMBL:BAQ76892.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
major facilitator family transporter rbh
S15_scaffold_34_curated_19
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21345..21761)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Pseudomonas fluorescens group RepID=Q4K632_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY94443.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_34_curated_20
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21927..22601)
DNA (675bp) protein (225aa)
Transcriptional activator protein CzcR n=2 Tax=Pseudomonas protegens RepID=R4RCH1_9PSED rbh
Two component heavy metal response transcriptional regulator {ECO:0000313|EMBL:BAQ83079.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
czcR5; transcriptional activator protein CzcR rbh
S15_scaffold_34_curated_21
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22986..24236
DNA (1251bp) protein (417aa)
Cobalt-zinc-cadmium resistance protein CzcC n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RRE6_9PSED rbh
czcC; cobalt-zinc-cadmium resistance protein CzcC rbh
Cobalt/zinc/cadmium resistance protein CzcC {ECO:0000313|EMBL:AAY94439.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_34_curated_22
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24434..25612
DNA (1179bp) protein (393aa)
Cobalt-zinc-cadmium resistance protein CzcB n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RMQ1_9PSED rbh
czcB; cobalt-zinc-cadmium resistance protein CzcB rbh
Cobalt/zinc/cadmium resistance protein CzcB {ECO:0000313|EMBL:AAY94438.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_34_curated_23
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25639..28776
DNA (3138bp) protein (1046aa)
Cobalt/zinc/cadmium resistance protein CzcA n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4K638_PSEF5 rbh
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:BAQ76885.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
czcA; cobalt/zinc/cadmium resistance protein CzcA rbh
S15_scaffold_34_curated_24
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28943..29401)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U7A049_9PSED
Uncharacterized protein {ECO:0000313|EMBL:BAQ83075.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
transposase
S15_scaffold_34_curated_25
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29744..29962)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=Q4K639_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY94436.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
S15_scaffold_34_curated_26
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30140..31468)
DNA (1329bp) protein (443aa)
Outer membrane porin, OprD family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4K640_PSEF5 rbh
Outer membrane porin {ECO:0000313|EMBL:BAQ83073.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
OprD family outer membrane porin rbh
S15_scaffold_34_curated_27
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31798..32130
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Pseudomonas protegens RepID=Q4K641_PSEF5
Uncharacterized protein {ECO:0000313|EMBL:BAQ76882.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
hypothetical protein
S15_scaffold_34_curated_28
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32147..32641)
DNA (495bp) protein (165aa)
Endoribonuclease L-PSP family protein n=2 Tax=Pseudomonas protegens RepID=Q4K642_PSEF5 rbh
Endoribonuclease L-PSP {ECO:0000313|EMBL:BAQ76881.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
endoribonuclease L-PSP
S15_scaffold_34_curated_29
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32864..34180
DNA (1317bp) protein (439aa)
Methyl-accepting chemotaxis transducer/sensory box protein n=2 Tax=Pseudomonas protegens RepID=Q4K643_PSEF5 rbh
Methyl-accepting chemotaxis transducer/sensory box protein {ECO:0000313|EMBL:BAQ83070.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
bdlA5; biofilm dispersion protein BdlA rbh
S15_scaffold_34_curated_30
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34371..35687
DNA (1317bp) protein (439aa)
Methyl-accepting chemotaxis transducer/sensory box protein n=2 Tax=Pseudomonas protegens RepID=Q4K644_PSEF5 rbh
Methyl-accepting chemotaxis transducer/sensory box protein {ECO:0000313|EMBL:BAQ76879.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
bdlA4; biofilm dispersion protein BdlA rbh
Displaying items 1-30 of 317 in total

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