ggKbase home page

S16_scaffold_732_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_732_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..3412
DNA (3411bp) protein (1137aa)
Glutamate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D0B9_STEMA rbh
Bacterial NAD-glutamate dehydrogenase superfamily protein {ECO:0000313|EMBL:EZP45555.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
NAD-glutamate dehydrogenase rbh
S16_scaffold_732_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3612..4385
DNA (774bp) protein (258aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23) rbh
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4T9_9GAMM rbh
S16_scaffold_732_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4432..5376
DNA (945bp) protein (315aa)
5'-nucleotidase (EC:3.1.3.5) rbh
5'-nucleotidase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SPA8_STRM5 rbh
5'-nucleotidase {ECO:0000313|EMBL:EZP45553.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_732_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6208..6894)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TK54_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP45551.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_732_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6891..8330)
DNA (1440bp) protein (480aa)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
exodeoxyribonuclease I (EC:3.1.11.1) rbh
Exodeoxyribonuclease I n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5W4_STEMA rbh
S16_scaffold_732_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8330..9697)
DNA (1368bp) protein (456aa)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Kynurenine 3-monooxygenase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=KMO_STRMK rbh
qbsG; Kynurenine 3-monooxygenase, siderophore biosynthesis rbh
S16_scaffold_732_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9727..11001)
DNA (1275bp) protein (425aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Kynureninase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KVZ3_STEMA rbh
hypothetical protein rbh
S16_scaffold_732_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11169..11690)
DNA (522bp) protein (174aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6) rbh
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SPA2_STRM5 rbh
S16_scaffold_732_curated_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11712..12374)
DNA (663bp) protein (221aa)
carbonate dehydratase (EC:4.2.1.1) rbh
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
Carbonic anhydrase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SPA1_STRM5 rbh
S16_scaffold_732_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12448..13086)
DNA (639bp) protein (213aa)
FMN-binding negative transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SPA0_STRM5 rbh
FMN-binding negative transcriptional regulator {ECO:0000313|EMBL:EZP45545.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
FMN-binding negative transcriptional regulator rbh
S16_scaffold_732_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13096..13410)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SP99_STRM5
Uncharacterized protein {ECO:0000313|EMBL:EZP45544.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_732_curated_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13418..13717)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SP98_STRM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCP17295.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
S16_scaffold_732_curated_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13751..15145)
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
Asparagine--tRNA ligase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SP97_STRM5 rbh
asnC; asparaginyl-tRNA synthetase rbh
S16_scaffold_732_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15276..15614
DNA (339bp) protein (113aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SP96_STRM5
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:EZP45541.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
iron-sulfur cluster assembly accessory protein
S16_scaffold_732_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15708..16250
DNA (543bp) protein (181aa)
UPF0167 protein cbrC n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D1N8_STEMA rbh
UPF0167 protein CbrC {ECO:0000313|EMBL:EZP45540.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_732_curated_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16452..16889
DNA (438bp) protein (146aa)
30S ribosomal protein S6 n=2 Tax=Stenotrophomonas maltophilia RepID=RS6_STRM5
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
rpsF; 30S ribosomal protein S6
S16_scaffold_732_curated_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16901..17131
DNA (231bp) protein (77aa)
30S ribosomal protein S18 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTM0_PSEUU
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
Displaying 17 items

View Taxonomy