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S16_scaffold_503_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_503_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..184
DNA (183bp) protein (61aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000360EC32
Putative transmembrane protein {ECO:0000313|EMBL:EZP43710.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_503_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177..2126
DNA (1950bp) protein (650aa)
Transglutaminase domain-containing protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K0A7_STEMA rbh
Membrane protein {ECO:0000313|EMBL:EZP43711.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
transglutaminase domain-containing protein rbh
S16_scaffold_503_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2123..2650
DNA (528bp) protein (176aa)
Slp family outer membrane lipoprotein n=3 Tax=Stenotrophomonas maltophilia RepID=J7UND1_STEMA rbh
Starvation lipoprotein Slp {ECO:0000313|EMBL:EZP43712.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
outer membrane lipoprotein rbh
S16_scaffold_503_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2772..3131)
DNA (360bp) protein (120aa)
bis(5'-nucleosyl)-tetraphosphatase (EC:3.6.1.17)
Bis(5'-nucleosyl)-tetraphosphatase (Asymmetrical) n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KKE4_STEMA
Histidine triad (HIT) protein {ECO:0000313|EMBL:EZP43713.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_503_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3198..3797)
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K0A4_STEMA rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
recombination protein recR rbh
S16_scaffold_503_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3909..4229)
DNA (321bp) protein (107aa)
Nucleoid-associated protein Smal_0858 n=4 Tax=Stenotrophomonas RepID=Y858_STRM5
Nucleoid-associated protein BW38_03175 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_503_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4236..6335)
DNA (2100bp) protein (700aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:EZP43716.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EZP43716.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
DNA polymerase III subunits gamma and tau (EC:2.7.7.7) rbh
DNA polymerase III subunit gamma/tau n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003695A01 rbh
S16_scaffold_503_curated_trna_1
unknown

Not on your lists

6446..6535
DNA (90bp)
transferRNA Ser
S16_scaffold_503_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6816..7610)
DNA (795bp) protein (265aa)
3-methyl-2-oxobutanoatehydroxymethyltransferase {ECO:0000313|EMBL:EZP43717.1}; EC=2.1.2.11 {ECO:0000313|EMBL:EZP43717.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SLQ1_STRM5 rbh
hypothetical protein rbh
S16_scaffold_503_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7734..8177
DNA (444bp) protein (148aa)
GCN5-related N-acetyltransferase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SLQ0_STRM5
Acyltransferase {ECO:0000313|EMBL:EZP43718.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
N-acetyltransferase GCN5
S16_scaffold_503_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8233..17496)
DNA (9264bp) protein (3088aa)
Transporter n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KEQ6_STEMA rbh
Autotransporter-associated beta strand {ECO:0000313|EMBL:EZP43719.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
autotransporter protein rbh
S16_scaffold_503_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17864..18181)
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=J7UNB6_STEMA
Quaternary ammonium compound-resistance protein sugE {ECO:0000313|EMBL:EZP43720.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
multidrug resistance protein/chaperone
S16_scaffold_503_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18654..19043)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VGN7_STEMA
Ribonuclease H {ECO:0000313|EMBL:EZP43721.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_503_curated_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19040..19807)
DNA (768bp) protein (256aa)
Beta-lactamase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KHQ1_STEMA rbh
Beta-lactamase {ECO:0000313|EMBL:EZP43722.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_503_curated_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19807..20583)
DNA (777bp) protein (259aa)
3-deoxy-D-manno-octulosonic acid kinase (EC:2.7.1.-) rbh
3-deoxy-D-manno-octulosonic acid kinase {ECO:0000256|HAMAP-Rule:MF_00521}; Short=Kdo kinase {ECO:0000256|HAMAP-Rule:MF_00521};; EC=2.7.1.166 {ECO:0000256|HAMAP-Rule:MF_00521};; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
3-deoxy-D-manno-octulosonic acid kinase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CVR9_STEMA rbh
S16_scaffold_503_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20598..21623
DNA (1026bp) protein (342aa)
waaF; ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-) rbh
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V4E3_STEMA rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EZP43724.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_503_curated_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21742..22146)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CJS5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP43725.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
Displaying 17 items

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