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S16_scaffold_1052_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_1052_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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159..842
DNA (684bp) protein (228aa)
Methyltransferase type 12 n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K0D4_STEMA rbh
Methyltransferase {ECO:0000313|EMBL:EZP43683.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
type 12 methyltransferase rbh
S16_scaffold_1052_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(858..1505)
DNA (648bp) protein (216aa)
SmQnr5 n=1 Tax=Stenotrophomonas maltophilia RepID=B5U9Z6_STEMA rbh
SmQnr1 {ECO:0000313|EMBL:EZP43684.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
smqnr; quinolone resistance protein rbh
S16_scaffold_1052_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1658..2452
DNA (795bp) protein (265aa)
Transcriptional regulator, DeoR family n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SMD8_STRM5 rbh
DeoR family transcriptional regulator SmQnrR {ECO:0000313|EMBL:EZP43685.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
DeoR family transcriptional regulator rbh
S16_scaffold_1052_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2464..3597
DNA (1134bp) protein (378aa)
Putative membrane protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G3T0_STEMA rbh
Major facilitator superfamily protein TcrA {ECO:0000313|EMBL:EZP43686.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
major facilitator superfamily protein rbh
S16_scaffold_1052_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3686..4966)
DNA (1281bp) protein (427aa)
Ricin B lectin n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K0D0_STEMA rbh
Secreted glycosyl hydrolase {ECO:0000313|EMBL:EZP43687.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Ricin B lectin rbh
S16_scaffold_1052_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5128..6633)
DNA (1506bp) protein (502aa)
PepSY-associated TM helix domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K0C9_STEMA rbh
PepSY-associated TM helix domain protein {ECO:0000313|EMBL:EZP43688.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
PepSY-associated TM helix domain-containing protein rbh
S16_scaffold_1052_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6645..8588)
DNA (1944bp) protein (648aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia AU12-09 PF7_STEMA">RepID=M5TPF7_STEMA rbh
TonB-dependent siderophore receptor subfamily protein {ECO:0000313|EMBL:EZP43689.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TonB-dependent siderophore receptor rbh
S16_scaffold_1052_curated_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8873..9262)
DNA (390bp) protein (130aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037E990B
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KDE90448.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
S16_scaffold_1052_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9433..9813)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7VGR4_STEMA
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:EZP43691.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
tautomerase
S16_scaffold_1052_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10372..10800
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KKG4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP43692.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_1052_curated_trna_1
unknown

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comp(10858..10929)
DNA (72bp)
transferRNA Val
Displaying 11 items

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