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S16_scaffold_1164_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_1164_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1312
DNA (1311bp) protein (437aa)
Signal peptide protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KXJ4_STEMA rbh
Putative signaling protein {ECO:0000313|EMBL:EZP45661.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
diguanylate phosphodiesterase rbh
S16_scaffold_1164_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1320..1979)
DNA (660bp) protein (220aa)
O-methyltransferase n=1 Tax=Rhizobium loti RepID=UPI00037ECCE6
SAM-dependent methlyltransferase {ECO:0000313|EMBL:EZP45662.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
O-methyltransferase, family 3
S16_scaffold_1164_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2082..2714
DNA (633bp) protein (211aa)
UPI0003CEBD72 related cluster n=1 Tax=unknown RepID=UPI0003CEBD72
HTH-type transcriptional repressor acnR {ECO:0000313|EMBL:EZP45663.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TetR family transcriptional regulator
S16_scaffold_1164_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2730..3374)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UMS8_STEMA rbh
HTH-type transcriptional regulator rutR {ECO:0000313|EMBL:EZP45664.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TetR family transcriptional regulator rbh
S16_scaffold_1164_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3445..4521
DNA (1077bp) protein (359aa)
Hydrolase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KTF4_STEMA rbh
Zinc-dependent hydrolase {ECO:0000313|EMBL:EZP45665.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_1164_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4543..5046)
DNA (504bp) protein (168aa)
Putative DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FNV7_STRMK
DNA-binding protein {ECO:0000313|EMBL:EZP45666.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
DNA-binding protein
S16_scaffold_1164_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5077..5319)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CYH0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP45667.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_1164_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5436..6233)
DNA (798bp) protein (266aa)
Putative NAD(P)H dehydrogenase {ECO:0000313|EMBL:EZP45668.1}; EC=1.6.5.2 {ECO:0000313|EMBL:EZP45668.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
NAD(P)H dehydrogenase n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002DCE7A8 rbh
NAD(P)H quinone oxidoreductase rbh
S16_scaffold_1164_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6318..7214
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=3 Tax=Azotobacter vinelandii RepID=C1DF77_AZOVD rbh
Nodulation protein D 1 {ECO:0000313|EMBL:EZP45669.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
transcriptional regulator, LysR family rbh
S16_scaffold_1164_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7329..7991
DNA (663bp) protein (221aa)
Coagulation factor 5/8 type domain protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4STI2_STRM5
Coagulation factor 5/8 type domain protein {ECO:0000313|EMBL:EZP45670.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
coagulation factor 5/8 type domain-containing protein
Displaying 10 items

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