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S16_scaffold_595_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_595_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1587
DNA (1587bp) protein (529aa)
choline dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031CACDB rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EZP47785.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
choline dehydrogenase
S16_scaffold_595_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1584..2981
DNA (1398bp) protein (466aa)
alcohol dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000319BA22 rbh
Alcohol dehydrogenase cytochrome c subunit {ECO:0000313|EMBL:EZP47786.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
cytochrome C
S16_scaffold_595_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2978..4249
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FFDE7F rbh
Outer membrane regulator of pathogenicity factors protein {ECO:0000313|EMBL:EZP47787.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_595_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4374..5948
DNA (1575bp) protein (525aa)
Putative Xaa-Pro dipeptidyl-peptidase Pro dipeptidyl-peptidase {ECO:0000313|EMBL:EZP47788.1}; EC=3.4.14.11 {ECO:0000313|EMBL:EZP47788.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Peptidase S15 n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SK60_STRM5 rbh
peptidase S15 rbh
S16_scaffold_595_curated_5

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6043..6402
DNA (360bp) protein (120aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BJ06_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP48764.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cold shock protein
S16_scaffold_595_curated_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6502..6906)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036D3D9F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34380.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S16_scaffold_595_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7370..8392)
DNA (1023bp) protein (341aa)
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EZP47789.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EZP47789.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Variovorax sp. CF313 RepID=J2TBG4_9BURK rbh
alcohol dehydrogenase zinc-binding domain-containing protein rbh
S16_scaffold_595_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8445..9233)
DNA (789bp) protein (263aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EZP47790.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EZP47790.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
AraC family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E6E8B9 rbh
Oxidoreductase, short chain dehydrogenase/reductase family
S16_scaffold_595_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9280..10377)
DNA (1098bp) protein (366aa)
N-ethylmaleimide reductase {ECO:0000313|EMBL:EZP47791.1}; EC=1.-.-.- {ECO:0000313|EMBL:EZP47791.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
N-ethylmaleimide reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030AD7D8 rbh
NADH:flavin oxidoreductase rbh
S16_scaffold_595_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10523..11104
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EEB49E
HTH-type transcriptional repressor dhaR {ECO:0000313|EMBL:EZP47792.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TetR family transcriptional regulator
S16_scaffold_595_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11160..11861)
DNA (702bp) protein (234aa)
Putative chaperone protein {ECO:0000313|EMBL:EZP47793.1}; EC=3.2.-.- {ECO:0000313|EMBL:EZP47793.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
dimethyl sulfoxide reductase subunit C n=3 Tax=Acetobacter aceti RepID=UPI00036B4131 rbh
protease I
S16_scaffold_595_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11878..12813)
DNA (936bp) protein (312aa)
NAD-dependent dehydratase n=1 Tax=Serratia liquefaciens ATCC 27592 RepID=S5EKG1_SERLI rbh
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EZP47794.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
NAD-dependent dehydratase rbh
S16_scaffold_595_curated_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12988..13440
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Serratia liquefaciens ATCC 27592 RepID=S5EHM5_SERLI
Mercuric resistance operon regulatory protein {ECO:0000313|EMBL:EZP47795.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_595_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13467..13769)
DNA (303bp) protein (101aa)
Fatty-acyl-CoA synthase {ECO:0000313|EMBL:EZP47796.1}; EC=6.2.1.- {ECO:0000313|EMBL:EZP47796.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
AMP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D30A5F
AMP-dependent synthetase and ligase
Displaying 14 items

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