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S16_scaffold_456_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_456_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..146
DNA (144bp) protein (48aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000366812D
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EZP47501.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
YhfP protein
S16_scaffold_456_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213..1040)
DNA (828bp) protein (276aa)
methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000377767B rbh
Methyltransferase {ECO:0000313|EMBL:EZP47502.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
type 11 methyltransferase rbh
S16_scaffold_456_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1051..2046)
DNA (996bp) protein (332aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
tRNA-dihydrouridine synthase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SK10_STRM5 rbh
nifR3 family TIM-barrel protein rbh
S16_scaffold_456_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2357..3322)
DNA (966bp) protein (322aa)
rbsK; ribokinase (EC:2.7.1.15) rbh
ribokinase n=1 Tax=Xanthomonadaceae RepID=UPI00029B241C rbh
Ribokinase {ECO:0000313|EMBL:EZP47504.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_456_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3349..4647)
DNA (1299bp) protein (433aa)
Na+ dependent nucleoside transporter domain protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SK15_STRM5 rbh
Nucleoside permease NupC {ECO:0000313|EMBL:EZP47505.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Na+ dependent nucleoside transporter domain-containing protein rbh
S16_scaffold_456_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4841..5812
DNA (972bp) protein (324aa)
Putative voltage-gated potassium channel subunit beta n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CUY6_STEMA rbh
Voltage-gated potassium channel beta subunit {ECO:0000313|EMBL:EZP47506.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
aldo/keto reductase rbh
S16_scaffold_456_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6004..6204
DNA (201bp) protein (67aa)
Uncharacterized protein n=11 Tax=Stenotrophomonas RepID=B2FPE1_STRMK
hemin uptake protein HemP
Hemin uptake protein HemP {ECO:0000313|EMBL:EZP47507.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_456_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6393..8543
DNA (2151bp) protein (717aa)
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JXW7_STEMA rbh
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor {ECO:0000313|EMBL:EZP47508.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor rbh
S16_scaffold_456_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8548..9150
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L0N2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP47509.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_456_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9223..10158
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JXW9_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP47510.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_456_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10403..12916)
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SK22_STRM5 rbh
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EZP47511.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_456_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12913..13560)
DNA (648bp) protein (216aa)
Spermidine/putrescine import ATP-binding protein potA n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CU21_STEMA rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZP47512.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ABC transporter ATP-binding protein rbh
S16_scaffold_456_curated_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13636..14283
DNA (648bp) protein (216aa)
lysophospholipase (EC:3.1.1.5) rbh
Lysophospholipase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SK24_STRM5 rbh
Lysophospholipase {ECO:0000313|EMBL:EZP47513.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_456_curated_14
Xanthomonas perforans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14374..15087
DNA (714bp) protein (238aa)
Putative two-component system response regulator transcriptional regulatory protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FPE8_STRMK rbh
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EGD14525.1}; TaxID=925776 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas perforans 91-118.;"
S16_scaffold_456_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15505..16509
DNA (1005bp) protein (335aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
psensor histidine kinase n=1 Tax=Xanthomonadaceae RepID=UPI00029A5858 rbh
two-component system sensor histidine kinase transcriptional regulator rbh
S16_scaffold_456_curated_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16661..17359)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJN2_STEMA rbh
Lipase/acylhydrolase {ECO:0000313|EMBL:EZP47516.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_456_curated_17
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17615..17989
DNA (375bp) protein (125aa)
Diacylglycerol kinase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SK28_STRM5
Diacylglycerol kinase {ECO:0000313|EMBL:EZP47517.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
diacylglycerol kinase
S16_scaffold_456_curated_18
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18023..18661
DNA (639bp) protein (213aa)
Integral membrane protein TerC n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SK29_STRM5 rbh
Integral membrane protein TerC {ECO:0000313|EMBL:EZP47518.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
integral membrane protein TerC rbh
Displaying 18 items

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