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S16_scaffold_1817_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_1817_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..233
DNA (231bp) protein (77aa)
Oxidoreductase family, NAD-binding Rossmann fold domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZE0_9GAMM
Oxidoreductase domain protein {ECO:0000313|EMBL:EZP45920.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
oxidoreductase
S16_scaffold_1817_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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250..1119
DNA (870bp) protein (290aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZE1_9GAMM rbh
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EZP45919.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Xylose isomerase domain-containing protein rbh
S16_scaffold_1817_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1138..1434
DNA (297bp) protein (99aa)
cytochrome C n=1 Tax=Pseudomonas geniculata RepID=UPI00029B44F2
Cytochrome c class I {ECO:0000313|EMBL:EZP45918.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
cytochrome c class I
S16_scaffold_1817_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1445..2203)
DNA (759bp) protein (253aa)
Large, multifunctional secreted protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZE3_9GAMM rbh
Large, multifunctional secreted protein {ECO:0000313|EMBL:EZP45917.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_1817_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2203..2778)
DNA (576bp) protein (192aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035DD675 rbh
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EZP45916.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_1817_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2778..2966)
DNA (189bp) protein (63aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SNA2_STRM5
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EZP45915.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
glucose-methanol-choline oxidoreductase
S16_scaffold_1817_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2936..4438)
DNA (1503bp) protein (501aa)
Putative oxidoreductase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FSL3_STRMK rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EZP45915.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
oxidoreductase rbh
S16_scaffold_1817_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4465..5355)
DNA (891bp) protein (297aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Xylose isomerase domain protein TIM barrel n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D6R7_STEMA rbh
xylose isomerase rbh
S16_scaffold_1817_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5556..6140)
DNA (585bp) protein (195aa)
Single-stranded DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CVP3_STEMA rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
single-stranded DNA-binding protein rbh
S16_scaffold_1817_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6424..7455
DNA (1032bp) protein (344aa)
LacI family transcription regulator {ECO:0000313|EMBL:EZP45912.1}; EC=5.1.1.1 {ECO:0000313|EMBL:EZP45912.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
LacI family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KE77_STEMA rbh
LacI family regulatory protein rbh
S16_scaffold_1817_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7550..8689)
DNA (1140bp) protein (380aa)
Histidine kinase-response regulator hybrid protein {ECO:0000313|EMBL:EZP45911.1}; EC=2.7.3.- {ECO:0000313|EMBL:EZP45911.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SN91_STRM5 rbh
PAS/PAC sensor hybrid histidine kinase rbh
Displaying 11 items

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