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S16_scaffold_567_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_567_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..299)
DNA (297bp) protein (99aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F52035
trmB; tRNA (guanine-N(7)-)-methyltransferase
S16_scaffold_567_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(299..1093)
DNA (795bp) protein (265aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Thiazole synthase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CVB1_STEMA rbh
thiG; thiazole biosynthesis protein rbh
S16_scaffold_567_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1226..1426)
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Stenotrophomonas RepID=B4STS5_STRM5
Sulfur carrier protein ThiS {ECO:0000313|EMBL:EZP47083.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
thiamine biosynthesis protein ThiS
S16_scaffold_567_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1634..3466
DNA (1833bp) protein (611aa)
Phospholipase/lecithinase/hemolysin n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KS51_STEMA rbh
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:EZP47082.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
phospholipase/lecithinase/hemolysin rbh
S16_scaffold_567_curated_trna_1
unknown

Not on your lists

3579..3649
DNA (71bp)
transferRNA Gly
S16_scaffold_567_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3944..4348
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K0S1_STEMA
Inner membrane protein yhaH {ECO:0000313|EMBL:EZP47081.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_567_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4493..4723
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TTA4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP47080.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_567_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4820..5698
DNA (879bp) protein (293aa)
Probable alpha-L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_01552};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Ribosomal protein S6 modification protein n=3 Tax=Stenotrophomonas maltophilia RepID=I0KS48_STEMA rbh
30S ribosomal protein S6 modification protein rbh
S16_scaffold_567_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5954..6430
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CVB6_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP47078.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_567_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6520..6993
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5LB71_STEMA
Putative secreted protein {ECO:0000313|EMBL:EZP47077.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_567_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7002..7679
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=10 Tax=Proteobacteria RepID=B4ST89_STRM5 rbh
Putative transcriptional regulator {ECO:0000313|EMBL:EZP47076.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
winged helix family two component transcriptional regulator rbh
S16_scaffold_567_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7642..9012
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TI37_STEMA rbh
integral membrane sensor signal transduction histidine kinase rbh
S16_scaffold_567_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9577..9963
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K0R3_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP47074.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_567_curated_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10016..10627)
DNA (612bp) protein (204aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
coaE; dephospho-CoA kinase (EC:2.7.1.24) rbh
Dephospho-CoA kinase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4ST87_STRM5 rbh
S16_scaffold_567_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10639..11502)
DNA (864bp) protein (288aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
prepilin peptidase (EC:3.4.23.43) rbh
N-methyltransferase n=1 Tax=Pseudomonas geniculata RepID=UPI00029ABC8D rbh
S16_scaffold_567_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11510..12769)
DNA (1260bp) protein (420aa)
Type II secretion system protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4ST85_STRM5 rbh
Type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:EZP47071.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
type II secretion system protein rbh
S16_scaffold_567_curated_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13122..13535
DNA (414bp) protein (138aa)
Fimbrial protein pilin n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4ST84_STRM5
Fimbrial protein pilin {ECO:0000313|EMBL:EZP47070.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
fimbrial protein pilin
S16_scaffold_567_curated_17
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13629..14033
DNA (405bp) protein (135aa)
Fimbrial protein pilin n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4ST83_STRM5
Fimbrial protein pilin {ECO:0000313|EMBL:EZP47069.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
fimbrial protein pilin
S16_scaffold_567_curated_18
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14033..14899
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4ST82_STRM5
Transmembrane and TPR repeat-containing protein 4 {ECO:0000313|EMBL:EZP47068.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
Displaying 19 items

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