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S16_scaffold_890_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_890_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(37..945)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator PA2877 n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSJ8_STEMA rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EZP43940.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
LysR family transcriptional regulator PA2877 rbh
S16_scaffold_890_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1062..1835
DNA (774bp) protein (258aa)
Dehydrogenase n=2 Tax=Stenotrophomonas maltophilia RepID=M3FCL5_STEMA rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EZP43941.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
short-chain dehydrogenase rbh
S16_scaffold_890_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1936..3009
DNA (1074bp) protein (358aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP43942.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_890_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3072..4133)
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85) rbh
3-isopropylmalate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5THL1_STEMA rbh
S16_scaffold_890_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4123..4701)
DNA (579bp) protein (193aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) rbh
3-isopropylmalate dehydratase small subunit n=3 Tax=Stenotrophomonas maltophilia RepID=I0KSJ5_STEMA rbh
S16_scaffold_890_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4701..6119)
DNA (1419bp) protein (473aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
leuC; 3-isopropylmalate dehydratase large subunit LeuC (EC:4.2.1.33) rbh
3-isopropylmalate dehydratase large subunit n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTR6_STRMK rbh
S16_scaffold_890_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6179..6958)
DNA (780bp) protein (260aa)
Methyltransferase type 11 n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K202_STEMA rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EZP43946.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
type 11 methyltransferase rbh
S16_scaffold_890_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6969..8555)
DNA (1587bp) protein (529aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
2-isopropylmalate synthase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D8H2_STEMA rbh
2-isopropylmalate synthase rbh
S16_scaffold_890_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8552..9643)
DNA (1092bp) protein (364aa)
threonine dehydratase n=1 Tax=Pseudomonas geniculata RepID=UPI00029A78A0 rbh
Putative catabolic threonine dehydratase {ECO:0000313|EMBL:EZP43948.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
pyridoxal-5'-phosphate-dependent protein beta subunit rbh
S16_scaffold_890_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9630..9743)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VRP9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP43949.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
S16_scaffold_890_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9740..9853)
DNA (114bp) protein (38aa)
Acetolactate synthase II small subunit n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D2V2_STEMA
Acetolactate synthase isozyme II small subunit {ECO:0000313|EMBL:EZP43950.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
acetolactate synthase isozyme II small subunit
Displaying 11 items

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