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S16_scaffold_724_curated

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S16_scaffold_724_curated_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..507
DNA (507bp) protein (169aa)
L-serine dehydratase 1 (EC:4.3.1.17)
Serine dehydratase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L5K3_STEMA
L-serine dehydratase {ECO:0000313|EMBL:EMI49000.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
S16_scaffold_724_curated_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

646..1641
DNA (996bp) protein (332aa)
alpha/beta hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036AFEDB rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EZP44918.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hydrolase rbh
S16_scaffold_724_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1732..2799)
DNA (1068bp) protein (356aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Homoserine dehydrogenase (EC:1.1.1.3 2.7.2.4) rbh
Homoserine dehydrogenase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KRN0_STEMA rbh
S16_scaffold_724_curated_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2796..4031)
DNA (1236bp) protein (412aa)
Cystathionine gamma-synthase {ECO:0000313|EMBL:EZP44916.1}; EC=2.5.1.48 {ECO:0000313|EMBL:EZP44916.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
cystathionine gamma-synthase (EC:2.5.1.48) rbh
O-succinylhomoserine (Thiol)-lyase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SSB7_STRM5 rbh
S16_scaffold_724_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4028..5059)
DNA (1032bp) protein (344aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
homoserine O-acetyltransferase (EC:2.3.1.31) rbh
Homoserine O-acetyltransferase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZK7_STEMA rbh
S16_scaffold_724_curated_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5392..6276
DNA (885bp) protein (295aa)
peptidase n=1 Tax=Pseudomonas geniculata RepID=UPI00029AE908 rbh
Peptidase {ECO:0000313|EMBL:EZP44914.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
membrane proteins related to metalloendopeptidases rbh
S16_scaffold_724_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6351..7955
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TTS0_STEMA rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
peptide chain release factor 3 rbh
S16_scaffold_724_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8052..8690
DNA (639bp) protein (213aa)
Channel protein, hemolysin III family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SSC1_STRM5 rbh
ADIPOR-like receptor C43G2.1 {ECO:0000313|EMBL:EZP44912.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hemolysin III family channel protein rbh
S16_scaffold_724_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8837..9550
DNA (714bp) protein (238aa)
AsmA family protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZL1_STEMA
AsmA family protein {ECO:0000313|EMBL:EZP44911.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
AsmA family protein
S16_scaffold_724_curated_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9580..10731
DNA (1152bp) protein (384aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000371468D rbh
AsmA family protein {ECO:0000313|EMBL:EZP44911.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
AsmA family protein rbh
S16_scaffold_724_curated_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11320..11751)
DNA (432bp) protein (144aa)
histidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FFB7B5
Putative signal transduction protein {ECO:0000313|EMBL:EZP47547.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
putative signal transduction protein
S16_scaffold_724_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11711..12730)
DNA (1020bp) protein (340aa)
Glucosyl transferase {ECO:0000313|EMBL:EZP47548.1}; EC=2.4.1.- {ECO:0000313|EMBL:EZP47548.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
bactoprenol glucosyl transferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EAFDDD rbh
family 2 glycosyl transferase rbh
S16_scaffold_724_curated_13
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12836..13585)
DNA (750bp) protein (250aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
peptidoglycan transglycosylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003064DB5 rbh
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase rbh
S16_scaffold_724_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13663..14556
DNA (894bp) protein (298aa)
33 kDa chaperonin (Heat shock protein 33) n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3ERP4_STEMA rbh
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
heat shock chaperonin rbh
S16_scaffold_724_curated_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14677..15531
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia RepID=V5YWF9_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP47551.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
S16_scaffold_724_curated_16
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15907..18669
DNA (2763bp) protein (921aa)
TonB-denpendent receptor n=1 Tax=Xanthomonadaceae RepID=UPI00029ACFBD rbh
TonB-dependent receptor domain protein {ECO:0000313|EMBL:EZP47552.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TonB-dependent outer membrane receptor rbh
S16_scaffold_724_curated_17
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18809..19411)
DNA (603bp) protein (201aa)
Transcriptional regulator n=2 Tax=Stenotrophomonas RepID=B8L9J5_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EZP47553.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TetR family transcriptional regulator rbh
S16_scaffold_724_curated_18
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19560..20471
DNA (912bp) protein (304aa)
bpoA; peroxidase BpoA (EC:1.11.1.-) rbh
peroxidase BpoA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000303EB09 rbh
Hydrolase, alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:EZP47554.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
S16_scaffold_724_curated_19
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20468..22438
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZM0_STEMA rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EZP47555.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein rbh
Displaying 19 items

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