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S18_scaffold_346_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_346_curated_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..231
DNA (231bp) protein (77aa)
Isochorismatase hydrolase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQW1_PSEMN
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:AEB60717.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(930..1883)
DNA (954bp) protein (318aa)
Transcriptional regulator, AraC family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XSU8_PSEMY rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABP84414.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_346_curated_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2094..2858
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudomonas mendocina DLHK RepID=J7SMF5_PSEME rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEB57753.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2958..4019)
DNA (1062bp) protein (354aa)
membrane protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036BA6E7 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB57754.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4206..4910
DNA (705bp) protein (235aa)
SAM-dependent methyltransferase n=1 Tax=Pseudomonas mendocina RepID=UPI0003646E4E rbh
type 11 methyltransferase rbh
Methyltransferase type 11 {ECO:0000313|EMBL:AEB57755.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4921..5424)
DNA (504bp) protein (168aa)
aldehyde-activating protein n=1 Tax=Pseudomonas mendocina RepID=UPI000363F8C8
glutathione-dependent formaldehyde-activating protein
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:AEB57756.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5631..7334
DNA (1704bp) protein (568aa)
Amidase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZZ4_PSEMN rbh
amidase rbh
Amidase {ECO:0000313|EMBL:AEB57760.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7609..9552)
DNA (1944bp) protein (648aa)
general secretion pathway protein D n=1 Tax=Pseudomonas mendocina RepID=UPI00036E9072 rbh
general secretion pathway protein D rbh
General secretion pathway protein D {ECO:0000313|EMBL:AEB57761.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9557..10204)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZZ6_PSEMN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB57762.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10435..11922
DNA (1488bp) protein (496aa)
General secretory pathway protein E n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZZ7_PSEMN rbh
general secretory pathway protein E rbh
General secretory pathway protein E {ECO:0000313|EMBL:AEB57763.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12046..13263
DNA (1218bp) protein (406aa)
general secretion pathway protein F n=1 Tax=Pseudomonas mendocina RepID=UPI00035E45E4 rbh
General secretion pathway protein GspF {ECO:0000313|EMBL:EZH79264.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
general secretion pathway protein F rbh
S18_scaffold_346_curated_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13307..13693
DNA (387bp) protein (129aa)
General secretion pathway protein G n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZZ9_PSEMN
general secretion pathway protein G
General secretion pathway protein G {ECO:0000313|EMBL:AEB57765.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13743..14294
DNA (552bp) protein (184aa)
general secretion pathway protein H n=1 Tax=Pseudomonas mendocina RepID=UPI0003740A6A
General secretion pathway protein GspH {ECO:0000313|EMBL:EZH79262.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
general secretion pathway protein H
S18_scaffold_346_curated_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14291..14677
DNA (387bp) protein (129aa)
General secretion pathway protein I n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4E001_PSEMN
general secretion pathway protein I
General secretion pathway protein I {ECO:0000313|EMBL:AEB57767.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_15
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14719..15420
DNA (702bp) protein (234aa)
general secretion pathway protein J n=1 Tax=Pseudomonas mendocina RepID=UPI00037C0D88 rbh
General secretion pathway protein GspJ {ECO:0000313|EMBL:KJU81105.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
general secretion pathway protein J rbh
S18_scaffold_346_curated_16
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15417..16388
DNA (972bp) protein (324aa)
Type II secretion system protein K n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4E003_PSEMN rbh
general secretion pathway protein K rbh
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16385..17524
DNA (1140bp) protein (380aa)
general secretion pathway protein L n=1 Tax=Pseudomonas mendocina RepID=UPI0003679B30 rbh
general secretion pathway protein L rbh
Type II secretion system protein L {ECO:0000256|PIRNR:PIRNR015761}; Short=T2SS protein L {ECO:0000256|PIRNR:PIRNR015761};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17521..18051
DNA (531bp) protein (177aa)
general secretion pathway protein M n=1 Tax=Pseudomonas mendocina RepID=UPI000376A946 rbh
general secretion pathway M protein rbh
General secretion pathway M protein {ECO:0000313|EMBL:AEB57771.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18522..19295
DNA (774bp) protein (258aa)
Cationic amino acid ABC transporter, periplasmic binding protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4E006_PSEMN rbh
cationic amino acid ABC transporter periplasmic binding protein rbh
Cationic amino acid ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:AEB57772.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19480..20169
DNA (690bp) protein (230aa)
Arginine/ornithine ABC transporter, permease protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4E007_PSEMN rbh
ABC transporter {ECO:0000313|EMBL:EZH79255.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
arginine/ornithine ABC transporter permease rbh
S18_scaffold_346_curated_21
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20180..20878
DNA (699bp) protein (233aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4E008_PSEMN rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EZH79254.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
polar amino acid ABC transporter permease rbh
S18_scaffold_346_curated_22
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20883..21671
DNA (789bp) protein (263aa)
aotP; arginine/ornithine transport protein AotP (EC:3.6.3.-)
Arginine/ornithine transport protein AotP {ECO:0000313|EMBL:CDM40087.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDM40087.1};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
Arginine/ornithine transport protein AotP n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JLD3_PSEPS rbh
S18_scaffold_346_curated_23
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21727..22707
DNA (981bp) protein (327aa)
Transcriptional regulator, AraC family n=2 Tax=Pseudomonas mendocina RepID=A4XWF1_PSEMY rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KJU81113.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
AraC family transcriptional regulator rbh
S18_scaffold_346_curated_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23078..24298
DNA (1221bp) protein (407aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Acetylornithine aminotransferase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4E012_PSEMN rbh
bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein rbh
S18_scaffold_346_curated_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24423..25439
DNA (1017bp) protein (339aa)
Arginine N-succinyltransferase {ECO:0000256|SAAS:SAAS00075375}; EC=2.3.1.109 {ECO:0000256|SAAS:SAAS00075375};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
arginine N-succinyltransferase n=1 Tax=Pseudomonas mendocina RepID=UPI000377351B rbh
arginine succinyltransferase rbh
S18_scaffold_346_curated_26
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25522..26538
DNA (1017bp) protein (339aa)
Arginine N-succinyltransferase {ECO:0000256|SAAS:SAAS00075375}; EC=2.3.1.109 {ECO:0000256|SAAS:SAAS00075375};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Arginine succinyltransferase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DLR2_PSEMN rbh
arginine succinyltransferase rbh
S18_scaffold_346_curated_27
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26600..28063
DNA (1464bp) protein (488aa)
N-succinylglutamate 5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01174}; EC=1.2.1.71 {ECO:0000256|HAMAP-Rule:MF_01174};; Succinylglutamic semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01174}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
astD; succinylglutamic semialdehyde dehydrogenase (EC:1.2.1.-)
N-succinylglutamate 5-semialdehyde dehydrogenase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JLD1_PSEPS rbh
S18_scaffold_346_curated_28
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28063..29409
DNA (1347bp) protein (449aa)
N-succinylarginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074425}; EC=3.5.3.23 {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074418};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
N-succinylarginine dihydrolase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DLR4_PSEMN rbh
succinylarginine dihydrolase rbh
S18_scaffold_346_curated_29
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29465..29743
DNA (279bp) protein (93aa)
topoisomerase II n=1 Tax=Pseudomonas mendocina RepID=UPI000382077B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB57783.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_346_curated_30
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29761..30774
DNA (1014bp) protein (338aa)
Succinylglutamate desuccinylase {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036677}; EC=3.5.1.96 {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036667};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
succinylglutamate desuccinylase n=1 Tax=Pseudomonas mendocina RepID=UPI0003821267 rbh
succinylglutamate desuccinylase rbh
Displaying items 1-30 of 34 in total

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