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S18_scaffold_180_curated

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_180_curated_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..697
DNA (696bp) protein (232aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DSK4_PSEMN rbh
TRAP dicarboxylate transporter subunit DctP rbh
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:AEB59659.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

758..1285
DNA (528bp) protein (176aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DSK5_PSEMN rbh
tripartite ATP-independent periplasmic transporter DctQ rbh
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:AEB59660.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1285..2565
DNA (1281bp) protein (427aa)
membrane protein n=1 Tax=Pseudomonas mendocina RepID=UPI00037CED72 rbh
TRAP dicarboxylate transporter subunit DctM rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AEB59661.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2661..3566
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DT96_PSEMN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59662.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3684..4439)
DNA (756bp) protein (252aa)
GntR family transcriptional regulator n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DT97_PSEMN rbh
GntR family transcriptional regulator rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:AEB59663.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4540..5415
DNA (876bp) protein (292aa)
Aldose 1-epimerase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DT98_PSEMN rbh
aldose 1-epimerase rbh
Aldose 1-epimerase {ECO:0000313|EMBL:AEB59664.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_7
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5656..5880
DNA (225bp) protein (75aa)
Beta-ketoadipyl CoA thiolase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1S8K7_PSEME
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:KFJ89798.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
hypothetical protein
S18_scaffold_180_curated_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6006..7481)
DNA (1476bp) protein (492aa)
Uncharacterized protein yjgR n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K559_PSEPS rbh
putative protein yjgR
Uncharacterized protein {ECO:0000313|EMBL:CDR90383.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
S18_scaffold_180_curated_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7638..9515
DNA (1878bp) protein (626aa)
chemotaxis protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI00030569D2 rbh
Chemotaxis protein {ECO:0000313|EMBL:EZH78703.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
methyl-accepting chemotaxis sensory transducer rbh
S18_scaffold_180_curated_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9567..9737)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JLZ6_PSEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDR90380.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
S18_scaffold_180_curated_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9749..10174)
DNA (426bp) protein (142aa)
Inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CDR90379.1}; EC=1.1.1.205 {ECO:0000313|EMBL:CDR90379.1};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7J128_PSEPS
S18_scaffold_180_curated_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10220..11071)
DNA (852bp) protein (284aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Formyltetrahydrofolate deformylase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTA3_PSEMN rbh
formyltetrahydrofolate deformylase rbh
S18_scaffold_180_curated_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11369..11743
DNA (375bp) protein (125aa)
H-NS family protein MvaT n=2 Tax=Pseudomonas mendocina RepID=A4XXK0_PSEMY
H-NS family protein MvaT
H-NS family protein MvaT {ECO:0000313|EMBL:ABP86066.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_180_curated_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11981..13414)
DNA (1434bp) protein (478aa)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
exonuclease I n=1 Tax=Pseudomonas mendocina RepID=UPI00038175DD rbh
exonuclease I rbh
S18_scaffold_180_curated_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13598..14356
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI00035FCC76 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59672.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14446..15171
DNA (726bp) protein (242aa)
Membrane protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SQJ4_PSEME rbh
RDD domain-containing protein rbh
Membrane protein {ECO:0000313|EMBL:KJU77649.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
S18_scaffold_180_curated_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15168..16148
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTA8_PSEMN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59674.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16135..17721
DNA (1587bp) protein (529aa)
membrane protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036E80E7 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59675.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17718..18908
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTB0_PSEMN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59676.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_20
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18905..19939
DNA (1035bp) protein (345aa)
moxR1; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.6.3.-)
magnesium chelatase n=1 Tax=Pseudomonas alcaliphila RepID=UPI000315B722 rbh
Magnesium chelatase {ECO:0000313|EMBL:ERH48148.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
S18_scaffold_180_curated_21
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19936..21267
DNA (1332bp) protein (444aa)
membrane protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI00031BFBA7 rbh
Membrane protein {ECO:0000313|EMBL:ERH48149.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
hypothetical protein rbh
S18_scaffold_180_curated_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21524..22105
DNA (582bp) protein (194aa)
sodB; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Superoxide dismutase n=4 Tax=Pseudomonas aeruginosa group RepID=F4DTB3_PSEMN rbh
S18_scaffold_180_curated_23
unknown

Not on your lists

comp(22215..22433)
DNA (219bp) protein (73aa)

This feature has no annotations

S18_scaffold_180_curated_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22515..24569
DNA (2055bp) protein (685aa)
diguanylate cyclase n=1 Tax=Pseudomonas mendocina RepID=UPI000364FBE5 rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AEB59682.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
diguanylate cyclase/phosphodiesterase rbh
S18_scaffold_180_curated_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24635..25540)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTB7_PSEMN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59683.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_26
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25542..26114)
DNA (573bp) protein (191aa)
Uncharacterized 25.5 kDa protein in gyrB 5'regionORF219 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K5A6_PSEPS rbh
lemA; putative 25,5 kDa protein in gyrB 5'region
Putative 25,5 kDa protein in gyrB 5'region {ECO:0000313|EMBL:CDM39736.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
S18_scaffold_180_curated_27
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26304..27641
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTB9_PSEMN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59685.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_28
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28471..29298)
DNA (828bp) protein (276aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTC0_PSEMN rbh
AraC family transcriptional regulator rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AEB59686.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_29
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29304..29873)
DNA (570bp) protein (190aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTC1_PSEMN rbh
N-acetyltransferase GCN5 rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEB59687.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_180_curated_30
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30076..33564
DNA (3489bp) protein (1163aa)
Sensory box histidine kinase/response regulator n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTC2_PSEMN rbh
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:AEB59688.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
sensory box histidine kinase/response regulator rbh
Displaying items 1-30 of 65 in total

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