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S18_scaffold_263_curated

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_263_curated_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..616
DNA (615bp) protein (205aa)
cytochrome oxidase subunit I n=1 Tax=Pseudomonas alcaliphila RepID=UPI000305E962
cytochrome-c oxidase
Cytochrome oxidase subunit I {ECO:0000313|EMBL:ERH52575.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
S18_scaffold_263_curated_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

627..1193
DNA (567bp) protein (189aa)
Cytochrome c oxidase assembly protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DW61_PSEMN rbh
cytochrome c oxidase assembly protein rbh
Cytochrome c oxidase assembly protein {ECO:0000313|EMBL:AEB56191.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1205..2101
DNA (897bp) protein (299aa)
Cytochrome c oxidase, subunit III n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DW62_PSEMN rbh
cytochrome c oxidase subunit III rbh
Cytochrome c oxidase, subunit III {ECO:0000313|EMBL:AEB56192.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2109..2312)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWV1_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB56193.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2384..3115
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI00035E4F2D rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB56194.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3090..3668
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003818CE9 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB56195.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3724..4779
DNA (1056bp) protein (352aa)
Cytochrome oxidase assembly n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWV4_PSEMN rbh
cytochrome oxidase assembly rbh
Cytochrome oxidase assembly {ECO:0000313|EMBL:AEB56196.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4803..5702
DNA (900bp) protein (300aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Protoheme IX farnesyltransferase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWV5_PSEMN rbh
protoheme IX farnesyltransferase rbh
S18_scaffold_263_curated_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5855..6487
DNA (633bp) protein (211aa)
copper-binding protein n=1 Tax=Pseudomonas mendocina RepID=UPI00037DF240 rbh
senC; electron transport protein SCO1/SenC
Copper-binding protein {ECO:0000313|EMBL:KJU75578.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
S18_scaffold_263_curated_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6576..7526)
DNA (951bp) protein (317aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Homoserine kinase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWV7_PSEMN rbh
homoserine kinase rbh
S18_scaffold_263_curated_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7543..7827)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002F92804
Uncharacterized protein {ECO:0000313|EMBL:EZH79823.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
hypothetical protein
S18_scaffold_263_curated_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7902..10697
DNA (2796bp) protein (932aa)
DNA polymerase I {ECO:0000313|EMBL:ABP82928.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABP82928.1};; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
DNA polymerase I (EC:2.7.7.7) rbh
DNA polymerase I n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XNL2_PSEMY rbh
S18_scaffold_263_curated_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11052..11702)
DNA (651bp) protein (217aa)
Probable GTP-binding protein EngB n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWW0_PSEMN rbh
ribosome biogenesis GTP-binding protein YsxC rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11944..12234
DNA (291bp) protein (97aa)
Cytochrome c5-like protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWW1_PSEMN
cytochrome c5-like protein
Cytochrome c5-like protein {ECO:0000313|EMBL:AEB56203.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12334..12939
DNA (606bp) protein (202aa)
Cytochrome C n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T393_PSEME rbh
Cytochrome C {ECO:0000313|EMBL:ERH52589.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
cytochrome c, class I rbh
S18_scaffold_263_curated_16
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13094..13720
DNA (627bp) protein (209aa)
Thiol:disulfide interchange protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWW3_PSEMN rbh
DsbA oxidoreductase rbh
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13740..14612
DNA (873bp) protein (291aa)
Endonuclease n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T270_PSEME rbh
Endonuclease {ECO:0000313|EMBL:ERH52591.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
endonuclease/exonuclease/phosphatase rbh
S18_scaffold_263_curated_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14618..16486
DNA (1869bp) protein (623aa)
Diguanylate cyclase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWW5_PSEMN rbh
Diguanylate cyclase {ECO:0000313|EMBL:AEB56207.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
diguanylate cyclase rbh
S18_scaffold_263_curated_19
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16539..17060)
DNA (522bp) protein (174aa)
Uracil permease n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U8F3_PSEME
uracil-xanthine permease
Uracil permease {ECO:0000313|EMBL:ERH52593.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
S18_scaffold_263_curated_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17289..17879
DNA (591bp) protein (197aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWW7_PSEMN rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
multiple antibiotic resistance (MarC)-like protein rbh
S18_scaffold_263_curated_21
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17876..18658
DNA (783bp) protein (261aa)
ampD; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDR89351.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CDR89351.1};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K4D5_PSEPS rbh
S18_scaffold_263_curated_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18655..19068)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UG28_PSEME
Uncharacterized protein {ECO:0000313|EMBL:ERH53992.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
hypothetical protein
S18_scaffold_263_curated_23
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19203..19871)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI000370719C rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB56211.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19922..20314)
DNA (393bp) protein (131aa)
Response regulator receiver protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWX0_PSEMN
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEB56212.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20464..23949
DNA (3486bp) protein (1162aa)
chemotaxis protein CheY n=1 Tax=Pseudomonas mendocina RepID=UPI00037400A9 rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AEB56213.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
multi-sensor hybrid histidine kinase rbh
S18_scaffold_263_curated_26
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23949..24758
DNA (810bp) protein (270aa)
MCP methyltransferase, CheR-type n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWX2_PSEMN rbh
chemotaxis protein CheR rbh
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:AEB56214.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_27
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24755..25366
DNA (612bp) protein (204aa)
chemotaxis protein CheB n=1 Tax=Pseudomonas mendocina RepID=UPI00037AF14F rbh
CheB methylesterase rbh
CheB methylesterase {ECO:0000313|EMBL:AEB56215.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_28
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25360..26547
DNA (1188bp) protein (396aa)
Histidine kinase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SLB1_PSEME rbh
Histidine kinase {ECO:0000313|EMBL:KJU75599.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
response regulator receiver sensor signal transduction histidine kinase rbh
S18_scaffold_263_curated_29
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26721..27020
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWX5_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB56217.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_263_curated_30
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27039..27224
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DWX6_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB56218.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Displaying items 1-30 of 52 in total

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