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S18_scaffold_303_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_303_curated_1
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1128
DNA (1128bp) protein (376aa)
Filamentous hemagglutinin-like protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DMW5_PSEMN
filamentous hemagglutinin-like protein
Filamentous hemagglutinin-like protein {ECO:0000313|EMBL:AEB59198.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1780..4935)
DNA (3156bp) protein (1052aa)
acriflavin resistance protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036184E7 rbh
Acriflavin resistance protein {ECO:0000313|EMBL:AEB59197.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
acriflavin resistance protein rbh
S18_scaffold_303_curated_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4937..6022)
DNA (1086bp) protein (362aa)
RND family efflux transporter MFP subunit n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DMW3_PSEMN rbh
RND family efflux transporter MFP subunit rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AEB59196.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6032..6688)
DNA (657bp) protein (219aa)
TetR family transcriptional regulator n=1 Tax=Pseudomonas mendocina RepID=UPI00036811A2 rbh
TetR family transcriptional regulator rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:AEB59195.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6899..7816)
DNA (918bp) protein (306aa)
XRE family transcriptional regulator n=1 Tax=Pseudomonas mendocina RepID=UPI0003625E89 rbh
LysR family transcriptional regulator rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AEB59194.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7985..10285
DNA (2301bp) protein (767aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DMW0_PSEMN rbh
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase rbh
S18_scaffold_303_curated_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10340..11470
DNA (1131bp) protein (377aa)
alpha/beta hydrolase n=1 Tax=Pseudomonas mendocina RepID=UPI0003827DB5 rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEB59192.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11472..11732)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DMV8_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB59191.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12010..12960
DNA (951bp) protein (317aa)
Membrane protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SBT9_PSEME rbh
Membrane protein {ECO:0000313|EMBL:KJU78252.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
Uncharacterized transporter HI0878
S18_scaffold_303_curated_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12967..13584)
DNA (618bp) protein (206aa)
NAD(P)H dehydrogenase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002D9ACF9 rbh
NAD(P)H dehydrogenase {ECO:0000313|EMBL:EZH76386.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
NAD(P)H dehydrogenase rbh
S18_scaffold_303_curated_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13577..14971)
DNA (1395bp) protein (465aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
Fumarate hydratase class II n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DMV5_PSEMN rbh
fumarate hydratase rbh
S18_scaffold_303_curated_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15056..16066)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DMV4_PSEMN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59187.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16341..16838
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Pseudomonas mendocina RepID=J7TZJ4_PSEME rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABP84455.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_303_curated_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16850..17143
DNA (294bp) protein (98aa)
Transcriptional regulator, BolA protein family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XSZ0_PSEMY
transcriptional regulator BolA
Transcriptional regulator, BolA protein family {ECO:0000313|EMBL:ABP84456.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_303_curated_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17503..18441
DNA (939bp) protein (313aa)
UPF0176 protein Pmen_1693 n=2 Tax=Pseudomonas mendocina RepID=Y1693_PSEMY rbh
hypothetical protein rbh
UPF0176 protein Pmen_1693 {ECO:0000255|HAMAP-Rule:MF_00469}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_303_curated_16
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18444..19076
DNA (633bp) protein (211aa)
DsbA oxidoreductase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DM61_PSEMN rbh
DsbA oxidoreductase rbh
DsbA oxidoreductase {ECO:0000313|EMBL:AEB59183.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_17
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19069..20850
DNA (1782bp) protein (594aa)
ABC transporter ATP-binding protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002E8A631 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJU81154.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
ABC transporter rbh
S18_scaffold_303_curated_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21294..22157)
DNA (864bp) protein (288aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1TXH9_PSEME rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ERH48813.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
LysR family transcriptional regulator rbh
S18_scaffold_303_curated_19
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22254..22991
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003150614 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZH76377.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
hypothetical protein rbh
S18_scaffold_303_curated_20
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22988..23314
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DM57_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB59179.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_21
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23539..24624
DNA (1086bp) protein (362aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27) rbh
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SAF5_PSEME rbh
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KJU81158.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
S18_scaffold_303_curated_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24629..25762
DNA (1134bp) protein (378aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5) rbh
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:ABP84461.1}; EC=1.13.11.5 {ECO:0000313|EMBL:ABP84461.1};; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
Homogentisate 1,2-dioxygenase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7TK20_PSEME rbh
S18_scaffold_303_curated_23
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25867..26853
DNA (987bp) protein (329aa)
MhpD; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase (EC:4.1.1.68)
2-keto-4-pentenoate hydratase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002DCD422 rbh
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:KFJ89693.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
S18_scaffold_303_curated_24
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26962..27612
DNA (651bp) protein (217aa)
maiA; maleylacetoacetate isomerase (EC:5.2.1.2)
Maleylacetoacetate isomerase {ECO:0000313|EMBL:CDM40130.1}; EC=5.2.1.2 {ECO:0000313|EMBL:CDM40130.1};; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
Maleylacetoacetate isomerase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7J0G4_PSEPS rbh
S18_scaffold_303_curated_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27704..29164
DNA (1461bp) protein (487aa)
Transporter n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DM52_PSEMN rbh
sodium:neurotransmitter symporter rbh
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_26
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29476..31425
DNA (1950bp) protein (650aa)
chemotaxis protein n=1 Tax=Pseudomonas mendocina RepID=UPI000361D17A rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEB59173.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
methyl-accepting chemotaxis sensory transducer rbh
S18_scaffold_303_curated_27
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31429..32202)
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XT02_PSEMY rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABP84468.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_303_curated_28
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32353..33054)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DM49_PSEMN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59171.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_303_curated_29
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33065..33271)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002F00746
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU81167.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
S18_scaffold_303_curated_30
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33315..34025)
DNA (711bp) protein (237aa)
RNA-binding S4 domain protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XT05_PSEMY rbh
RNA-binding S4 domain-containing protein rbh
RNA-binding S4 domain protein {ECO:0000313|EMBL:ABP84471.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
Displaying items 1-30 of 35 in total

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