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S18_scaffold_60_curated

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_60_curated_1
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..394
DNA (393bp) protein (131aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7JLR1_PSEPS
ribonucleotide-diphosphate reductase subunit beta
S18_scaffold_60_curated_2
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

500..1972
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas piscicida JCM 20779 RepID=U1JUS2_PSEO7 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERG33453.1}; TaxID=1117317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida JCM 20779.;"
hypothetical protein rbh
S18_scaffold_60_curated_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1993..2643)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GPH2_PSEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA88648.1}; TaxID=644801 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri RCH2.;"
S18_scaffold_60_curated_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3318..4379
DNA (1062bp) protein (354aa)
Aldo/keto reductase n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XX42_PSEMY rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:ABP85908.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_60_curated_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4399..5283)
DNA (885bp) protein (295aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XX43_PSEMY rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABP85909.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_60_curated_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5437..5667)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K4W5_PSEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM39889.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
S18_scaffold_60_curated_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5612..5947)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002EDFA6D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB59469.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6196..6723)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CML5_PSEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM31322.1}; TaxID=1196835 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri CCUG 29243.;"
S18_scaffold_60_curated_9
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6888..7583
DNA (696bp) protein (232aa)
Acetyltransferase, GNAT family n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IEP0_PSEPS rbh
acetyltransferase, GNAT family
Acetyltransferase, GNAT family {ECO:0000313|EMBL:CDM39887.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
S18_scaffold_60_curated_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7801..8658
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036D0CB8 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59472.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8682..9581)
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas mendocina RepID=UPI00036D19BB rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABP85912.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_60_curated_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9701..10402
DNA (702bp) protein (234aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
FMN-dependent NADH-azoreductase n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XX47_PSEMY rbh
NAD(P)H dehydrogenase (quinone) rbh
S18_scaffold_60_curated_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10445..11458)
DNA (1014bp) protein (338aa)
Sterol desaturase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQQ0_PSEMN rbh
sterol desaturase rbh
Sterol desaturase {ECO:0000313|EMBL:AEB59477.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11569..12312)
DNA (744bp) protein (248aa)
SAM-dependent methyltransferase n=1 Tax=Pseudomonas mendocina RepID=UPI000375B954 rbh
type 12 methyltransferase rbh
Methyltransferase type 12 {ECO:0000313|EMBL:AEB59478.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12492..13802
DNA (1311bp) protein (437aa)
chemotaxis protein n=1 Tax=Pseudomonas mendocina RepID=UPI00037ACA75 rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEB59479.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_16
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14011..15102
DNA (1092bp) protein (364aa)
Gluconolactonase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQQ3_PSEMN rbh
Gluconolactonase {ECO:0000313|EMBL:EZH82356.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
gluconolactonase rbh
S18_scaffold_60_curated_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15312..15791
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQQ4_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB59481.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16005..16352
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQQ5_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB59482.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_19
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16582..17172
DNA (591bp) protein (197aa)
electron transporter SenC n=1 Tax=Pseudomonas pelagia RepID=UPI0003A80505
Strain MEJ086 contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ06055.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
electron transport protein SCO1/SenC
S18_scaffold_60_curated_20
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17162..17824
DNA (663bp) protein (221aa)
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AHS8_PSEF1
cytochrome c oxidase caa3-type, assembly factor CtaG-like protein
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AEF21602.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
S18_scaffold_60_curated_21
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18022..18498
DNA (477bp) protein (159aa)
ecotin n=1 Tax=Pseudomonas mendocina RepID=UPI00035ED306
proteinase inhibitor I11, ecotin
Proteinase inhibitor I11, ecotin {ECO:0000313|EMBL:AEB59485.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18685..19506
DNA (822bp) protein (274aa)
histidine kinase n=1 Tax=Pseudomonas mendocina RepID=UPI000379A1E4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59486.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_23
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19583..20227)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036FB8F4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB59487.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_24
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20534..22543
DNA (2010bp) protein (670aa)
Peptidase U32 n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XX53_PSEMY rbh
peptidase U32 rbh
Peptidase U32 {ECO:0000313|EMBL:ABP85919.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_60_curated_25
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22577..23092)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Pseudomonas moraviensis R28 RepID=V8R7B9_9PSED
Lipoprotein {ECO:0000313|EMBL:KHA73582.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
hypothetical protein
S18_scaffold_60_curated_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23089..23613)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RIX8_9PSED
Strain MEP34 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIP90764.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
S18_scaffold_60_curated_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23610..24272)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000289132F
putative lipoprotein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
S18_scaffold_60_curated_28
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24585..25898)
DNA (1314bp) protein (438aa)
chemotaxis protein n=1 Tax=Pseudomonas mendocina RepID=UPI00037D6954 rbh
methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AEB59491.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_29
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26024..26320)
DNA (297bp) protein (99aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Pseudomonas mendocina RepID=UPI0003639AD2
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AEB59493.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_60_curated_30
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26472..27059
DNA (588bp) protein (196aa)
NAD(P)H dehydrogenase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQR7_PSEMN rbh
NAD(P)H dehydrogenase rbh
NAD(P)H dehydrogenase {ECO:0000313|EMBL:AEB59494.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Displaying items 1-30 of 149 in total

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