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S18_scaffold_45_curated

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_45_curated_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..2599)
DNA (2598bp) protein (866aa)
Potassium efflux system protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K0H8_PSEPS rbh
kefA; Potassium efflux system protein
Potassium efflux system protein {ECO:0000313|EMBL:CDM39066.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
S18_scaffold_45_curated_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2725..4512)
DNA (1788bp) protein (596aa)
K(+)/H(+) antiporter NhaP2 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IDA5_PSEPS rbh
ycgO; Cell volume regulation protein A
K(+)/H(+) antiporter NhaP2 {ECO:0000256|HAMAP-Rule:MF_01075, ECO:0000256|SAAS:SAAS00010739}; Potassium/proton antiporter NhaP2 {ECO:0000256|HAMAP-Rule:MF_01075}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
S18_scaffold_45_curated_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4631..6436)
DNA (1806bp) protein (602aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XPR5_PSEMY rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABP83331.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_45_curated_4
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6556..7608)
DNA (1053bp) protein (351aa)
2-nitropropane dioxygenase, NPD n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XPR6_PSEMY rbh
2-nitropropane dioxygenase rbh
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:ABP83332.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_45_curated_5
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7725..8579
DNA (855bp) protein (285aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DNB2_PSEMN rbh
hypothetical protein rbh
S18_scaffold_45_curated_6
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8686..9939)
DNA (1254bp) protein (418aa)
Metal dependent phosphohydrolase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DNB3_PSEMN rbh
metal dependent phosphohydrolase rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEB56673.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_45_curated_7
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10016..10213)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SMC7_PSEME
Uncharacterized protein {ECO:0000313|EMBL:ERH52960.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
hypothetical protein
S18_scaffold_45_curated_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10230..10883)
DNA (654bp) protein (218aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DNB5_PSEMN rbh
peptide methionine sulfoxide reductase rbh
S18_scaffold_45_curated_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10934..13639)
DNA (2706bp) protein (902aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DNB6_PSEMN rbh
diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AEB56676.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_45_curated_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13804..14310
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI00036CC637
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB56677.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_45_curated_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14326..14766)
DNA (441bp) protein (147aa)
membrane protein n=1 Tax=Pseudomonas mendocina RepID=UPI00035E64C9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB56678.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_45_curated_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14926..16905)
DNA (1980bp) protein (660aa)
aceF; dihydrolipoamide acetyltransferase (EC:2.3.1.12) rbh
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
dihydrolipoamide acetyltransferase n=1 Tax=Pseudomonas mendocina RepID=UPI00036D5434 rbh
S18_scaffold_45_curated_13
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16917..19562)
DNA (2646bp) protein (882aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
pyruvate dehydrogenase n=1 Tax=Pseudomonas mendocina RepID=UPI00037AB364 rbh
pyruvate dehydrogenase subunit E1 rbh
S18_scaffold_45_curated_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19834..22776
DNA (2943bp) protein (981aa)
glnE; glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IX92_PSEPS rbh
S18_scaffold_45_curated_15
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22840..23763
DNA (924bp) protein (308aa)
Branched-chain amino acid aminotransferase n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DNC2_PSEMN rbh
branched-chain amino acid aminotransferase rbh
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AEB56682.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
S18_scaffold_45_curated_16
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23824..24867
DNA (1044bp) protein (348aa)
Lipopolysaccharide heptosyltransferase II n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DNC3_PSEMN rbh
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KFJ92207.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
lipopolysaccharide heptosyltransferase II rbh
S18_scaffold_45_curated_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24869..25873
DNA (1005bp) protein (335aa)
ADP-heptose:LPS heptosyl transferase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T4D0_PSEME rbh
ADP-heptose:LPS heptosyl transferase {ECO:0000313|EMBL:ERH52969.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
lipopolysaccharide heptosyltransferase I rbh
S18_scaffold_45_curated_18
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25883..27004
DNA (1122bp) protein (374aa)
Glycosyl transferase, group 1 n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XPT5_PSEMY rbh
group 1 glycosyl transferase rbh
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABP83351.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
S18_scaffold_45_curated_19
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27135..27962
DNA (828bp) protein (276aa)
Lipopolysaccharide core heptose(I) kinase {ECO:0000256|PIRNR:PIRNR037318}; EC=2.7.1.- {ECO:0000256|PIRNR:PIRNR037318};; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
waaP; heptose (I) phosphotransferase (EC:2.7.1.-)
Heptose (I) phosphotransferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IX94_PSEPS rbh
S18_scaffold_45_curated_20
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27959..28696
DNA (738bp) protein (246aa)
cdk2; Cell division protein kinase 2 (EC:2.7.11.22)
Cell division protein kinase 2 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K0I6_PSEPS rbh
Strain MEJ086 contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00494.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
S18_scaffold_45_curated_21
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28693..29442
DNA (750bp) protein (250aa)
Lipopolysaccharide kinase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UD76_PSEME rbh
Strain MEJ086 contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00495.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
putative lipopolysaccharide kinase
S18_scaffold_45_curated_22
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29439..30869
DNA (1431bp) protein (477aa)
Protein kinase-like (EC:2.7.1.-)
Serine/threonine protein kinase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U9K0_PSEME rbh
Strain MEJ086 contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00496.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
S18_scaffold_45_curated_23
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30947..32722
DNA (1776bp) protein (592aa)
Carbamoyltransferase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T4D4_PSEME rbh
Carbamoyltransferase {ECO:0000313|EMBL:ERH52974.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
Carbamoyltransferase rbh
S18_scaffold_45_curated_24
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32725..33801
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003B55D44 rbh
Strain MEJ086 contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00498.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
hypothetical protein
S18_scaffold_45_curated_25
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34026..35159
DNA (1134bp) protein (378aa)
glycosyl transferase n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036BF5A6 rbh
Strain MEJ086 contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00499.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
group 1 glycosyl transferase rbh
S18_scaffold_45_curated_26
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35156..36070
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI000369041B rbh
Strain MEJ086 contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00500.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
putative glycosyl transferase
S18_scaffold_45_curated_27
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36177..37250
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D127_9ARCH rbh
Strain MEJ086 contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00536.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
spore maturation protein rbh
S18_scaffold_45_curated_28

Not on your lists

37282..38073
DNA (792bp) protein (264aa)
Putative glycosyltransferase n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G0A3_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:KKO00006.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyltransferase
S18_scaffold_45_curated_29
Pseudomonas psychrotolerans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38099..38959
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JDU5_9PSED
Putative uncharacterized protein {ECO:0000313|EMBL:EHK70841.1}; TaxID=1112217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas psychrotolerans L19.;"
hypothetical protein
S18_scaffold_45_curated_30
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38940..40181)
DNA (1242bp) protein (414aa)
Strain MEJ086 contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00501.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
Displaying items 1-30 of 136 in total

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