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S18_scaffold_45_curated_32

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: 41080..42894

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 606.0
  • Bit_score: 1089
  • Evalue 0.0
ATP-binding protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T3B1_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 595.0
  • Bit_score: 899
  • Evalue 1.00e-258
  • rbh
msbA; transport protein MsbA similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 598.0
  • Bit_score: 887
  • Evalue 1.10e-255
  • rbh

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Taxonomy

Pseudomonas fulva → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1815
ATGCCTGATTCAAGCACCAAAGCCTCCCCGATCTCCAGCTTCAAGTTGTACATGCGGCTGTTGAGCTACATGAGGCGCTACTGGGTGATGTTCGGCGTCAGCATGATCGGTTACATCATCTTCGCCTCGACTCAGCCGATGCTCGCCGGGCTACTCAAGTACTTCGTCGACGGGCTCGCCAGCCCCGAGGCCGGCATGGTCGAGCTGCCGCTGCTCGGCAGTATGCAATTGCTCTATGGTGTGCCGCTGGCATTGTTGCTGATCACATTCTGGCAGGGTATCGGCTCCTTTCTCGGTGGTTATTACCTTGCCCGGGTGTCGCTGGGCTTGGTGCAGGATCTGCGCATCGCGCTGTTCAACAACCTGCTGACGCTGCCCAACCGTTACTTTGACAATCACTCCACCGGCTACCTGATTTCGCGCATCACTTACAACGTCGGTTCAGTTACCGGCGCGGCGACGGACGCCCTGAAGGTCATGGTGCGCGAAGGCCTGACGGTGGTTTTCCTGTTCGGCTACCTGCTGTGGATGAACTGGAAACTGACCATGGTGATGGTGGCGATCCTGCCACTCATTGCACTGATGGTTAAGAGTGCGAGCAAGAAATTCCGCAGCCAGAGCCGCAAGATCCAGAGCGCGATGGGCGAGTTGACCCATGTCTCCTCCGAAACCATCCAGAATTACCGTGTGGTGCGCAGTTTCGGTGGCGAGCGCTACGAACGTGAGCGCTTTTATGACGCGAGCGAGGACAGTACGCGCAAGCAACTGCGTATGACGCGTACCAGTGCGATCTATACGCCTAGCCTGCAACTGGTGAACTACGCCGCCATGGCATTTCTGATGTTCCTGGTGCTGTTCCTGCGCGGCGATGCCAGTGTGGGTGATCTGGTTGCTTACATTACTGCTGCGGGACTTTTGCCCAAGCCGATTCGCCAGCTCTCGGAGGTCAGCTCGACCATTCAGAAAGGGCTTGCCGGCGCCGAAAGTATCTTTGAGCAATTGGACGAGGCGCCCGAACCGGATCGGGGTACAGTCGAGAAAGAACGGGTCAGCGGAGCTCTCGAAGTCAAACATCTGAGCTTCGTCTACCCGGACACTGAGAAAACCGTCCTGCAAGACATCAGCTTTAGCGTCGAGCCGGGGCAGATGGTGGCGCTGGTCGGTCGCTCAGGTAGCGGCAAGTCTACGCTGGCCAATCTGATTCCGCGCTTCTATCAGCATGATCAAGGGCAAATTCTGCTCGATGGCACGCCTATAGAAGACTACCGCATCGAGAACCTCAGAAAGCACATCGCTTTGGTCACGCAACAGGTTTCCCTGTTCAACGACACCGTCGTCAACAATATCGCCTATGGTGATCTGCGCAATTTGCCGCGCGAGGCGGTGGAGCAGGCCGCCGAGGCTGCCTATGCCCGCGAATTCATCGATCTGCTTCCGCAGGGGTTCGACACCAAGGTGGGGGAGGATGGCGTCATGCTGTCGGGCGGGCAGCGTCAGCGTCTGGCGATCGCCCGGGCCTTGCTCAAGAGCGCGCCCGTGCTGATTCTCGATGAGGCGACCTCGGCGCTGGACACGGAGTCCGAGCGTTATATTCAGGCCGCGCTGGACAAGGTCATGGAAGGTCGTACCACACTGGTCATCGCGCATCGGTTGTCGACCATCGAAAAGGCCGATCTGATCCTGGTCATGGATCAGGGGCGCATCGTCGAGCGCGGCACCCACGAGTCGCTGCTCGCGCAGAACGGTTACTACGCCCGACTTCATGCCATGGGCCTAGAGGAAAAGGACGAGTCGCAAGAGCAGCCCAAATCCTGA
PROTEIN sequence
Length: 605
MPDSSTKASPISSFKLYMRLLSYMRRYWVMFGVSMIGYIIFASTQPMLAGLLKYFVDGLASPEAGMVELPLLGSMQLLYGVPLALLLITFWQGIGSFLGGYYLARVSLGLVQDLRIALFNNLLTLPNRYFDNHSTGYLISRITYNVGSVTGAATDALKVMVREGLTVVFLFGYLLWMNWKLTMVMVAILPLIALMVKSASKKFRSQSRKIQSAMGELTHVSSETIQNYRVVRSFGGERYERERFYDASEDSTRKQLRMTRTSAIYTPSLQLVNYAAMAFLMFLVLFLRGDASVGDLVAYITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEPDRGTVEKERVSGALEVKHLSFVYPDTEKTVLQDISFSVEPGQMVALVGRSGSGKSTLANLIPRFYQHDQGQILLDGTPIEDYRIENLRKHIALVTQQVSLFNDTVVNNIAYGDLRNLPREAVEQAAEAAYAREFIDLLPQGFDTKVGEDGVMLSGGQRQRLAIARALLKSAPVLILDEATSALDTESERYIQAALDKVMEGRTTLVIAHRLSTIEKADLILVMDQGRIVERGTHESLLAQNGYYARLHAMGLEEKDESQEQPKS*