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S18_scaffold_303_curated_35

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(41548..42870)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000255|HAMAP-Rule:MF_01865};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000255|HAMAP-Rule:MF_01865}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 440.0
  • Bit_score: 879
  • Evalue 1.50e-252
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=RIMO_PSEMY similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 440.0
  • Bit_score: 879
  • Evalue 1.00e-252
  • rbh
30S ribosomal protein S12 methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 440.0
  • Bit_score: 879
  • Evalue 2.90e-253
  • rbh

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGTCCACCGCCACACCGAAAGTCGGCTTCGTTTCCCTGGGTTGCCCCAAGGCCACCGTCGACTCCGAACGCATCCTGACCCAGCTGCGCATGGAAGGTTACGAGATCGTACCGACCTACCAGGATGCCGACGTGGTGGTGGTCAATACCTGCGGCTTTATCGACAGCGCCAAGGCCGAGTCGCTGGACGCCATCGGCGAAGCACTGGCCGAGAATGGCAAGGTCATCGTCACCGGCTGCATGGGCGTGGCCGAGGACAGCATCCGCGATGTGCACCCCAGCGTGCTGGCCGTCACCGGCCCGCAGCAGTACGAGCAGGTGGTCAGCGCGGTGCACGAGGTCATCCCGCCTGCTACCTCCCACAACCCGCTGATCGACCTGGTGCCGCCGCAGGGCATCAAGCTGACCCCACGCCACTACGCCTACCTGAAGATTTCCGAAGGCTGCAACCATACCTGTAGCTTCTGCATCATCCCGTCGATGCGCGGCAAGCTGGTCAGCCGTCCGGTGGGTGATGTGCTCGGCGAGGCCGAGCGCCTGGTCAAGGCTGGCGTAAAGGAGCTGCTGGTGATCAGCCAGGACACCAGCGCCTATGGCGTCGACATGAAGTACAAGCTGGACTTCTGGAACGGCCAGCCGGTGAAGACGCGCATGCTCGAGCTGTGCGAGGCGCTGTCGTCGATGGGCGTGTGGGTGCGCCTGCACTATGTCTACCCCTACCCCAACGTCGACGACGTGATCCCGCTGATGGCCGCCGGCAAGCTGCTGCCGTACCTGGATATCCCCTTCCAGCACGCCAGCCCGAAAGTGCTCAAGTCGATGAAGCGTCCGGCCTTCGAAGACAAGACCCTGGCGCGCATCAAGAAGTGGCGCGAGATCTGCCCGGAGCTGACCATCCGCTCCACCTTCATCGTCGGTTTCCCCGGCGAGACCGAAGAAGACTTCCAGTACCTGCTGGACTGGCTCACCGAAGCGCAGCTCGACCGCGTCGGCTGCTTCCAGTACTCGCCTGTAGACGGCGCGCCGGCCAACGACCTGGGCCTGGAACCAGTACCGGATGACGTCAAGCAGGAGCGCTGGGAGCGCTTCATGGCGCACCAGCAGGCGATCAGCTCGGCACGCCTGCAGGCCAAGATCGGCCTGGAAATGGACGTGCTGGTCGATGAAGTGGATGGCGAAGGTGCGGTGGCCCGCTCCTGGGCCGATGCCCCGGAGATCGACGGCAGCGTGTTCATCGACTCCACCAGCGTCAAGCCGGGCGACAAGGTGCGCGTGCGCATCGTCGACGCCGATGAATACGACATGTGGGGCGAGCTGGTCTGA
PROTEIN sequence
Length: 441
MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAESLDAIGEALAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVSAVHEVIPPATSHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLGEAERLVKAGVKELLVISQDTSAYGVDMKYKLDFWNGQPVKTRMLELCEALSSMGVWVRLHYVYPYPNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPELTIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVDGAPANDLGLEPVPDDVKQERWERFMAHQQAISSARLQAKIGLEMDVLVDEVDGEGAVARSWADAPEIDGSVFIDSTSVKPGDKVRVRIVDADEYDMWGELV*