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S18_scaffold_331_curated_29

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(27444..28136)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 230.0
  • Bit_score: 435
  • Evalue 2.90e-119
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 230.0
  • Bit_score: 429
  • Evalue 4.20e-118
  • rbh
Pseudouridine synthase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1UF10_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 230.0
  • Bit_score: 435
  • Evalue 2.10e-119
  • rbh

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGCGCCTGGATCGCTTCCTCAGCAACTTTCCGCGTTTCAGCCGCCAGGACAGCCGCCTGCTGATCAGCGCCGGTCGCCTGCGCGTGGACGGAGAGGTCATTAACGACCCGCGCCATGAGATCCGCGACTTCCACCGCGTGGAGCTGGACGACGAACTCCTGCAGGCCGGGCGCAGCGCGCGTTACTGGATGCTGCACAAGCCGGTCGGCGTGGTCAGCGCCACCGAACACCACGGGCACCGCACCGTCCTCGACCTGCTCGACGAGCCGGACAAGCACGACCTGCACCTGGCCGGACGCCTGGATCTCAATACCAGCGGCCTGCTGCTGATCACCAACGACGGGCGCTGGTCGCGGCGCATCACCCAGCCGCAGCAGCGCAAGCCCAAGGTCTATCACGTCACCACCGAACAGCCGATCACCGGCGAGTATGCCGAAGTGTTCGAGCGCGGCCTGTACTTTGCCTTCGAAGATCTCACCACCCTGCCCGCACAGCTCGACGTACTGAGCAGTCACCAAGCCCGCCTGACCCTGTTCGAGGGCCGCTATCATCAGGTCAAGCGCATGTTCGGCCACTTCCGCAATCGCGTGGTCGCCCTGCATCGCGAAAGCATGGGCGAGATCAAGCTCGATCCACAGCTCGCCCCAGGCCAGTACCGCGCGCTGACCGCTGCCGAAATCGCCAGCGTCTGA
PROTEIN sequence
Length: 231
MRLDRFLSNFPRFSRQDSRLLISAGRLRVDGEVINDPRHEIRDFHRVELDDELLQAGRSARYWMLHKPVGVVSATEHHGHRTVLDLLDEPDKHDLHLAGRLDLNTSGLLLITNDGRWSRRITQPQQRKPKVYHVTTEQPITGEYAEVFERGLYFAFEDLTTLPAQLDVLSSHQARLTLFEGRYHQVKRMFGHFRNRVVALHRESMGEIKLDPQLAPGQYRALTAAEIASV*