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S18_scaffold_737_curated

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S18_scaffold_737_curated_1
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(1..1719)
DNA (1719bp) protein (573aa)
glutamate synthase (ferredoxin) (EC:1.4.7.1) rbh
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:AEJ19996.1}; EC=1.4.7.1 {ECO:0000313|EMBL:AEJ19996.1};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Glutamate synthase (Ferredoxin) n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3Q2_SPICH rbh
S18_scaffold_737_curated_2
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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2080..2520
DNA (441bp) protein (147aa)
Ferric uptake regulator, Fur family id=3973391 bin=GWC2_Spirochaete_52_13 species=Treponema succinifaciens genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ferric uptake regulator, Fur family
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_3
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(2591..3580)
DNA (990bp) protein (330aa)
HflC protein id=3973387 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
HflC protein rbh
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_4
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(3577..4572)
DNA (996bp) protein (332aa)
HflK protein id=3973383 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
HflK protein rbh
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_5
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


4710..6935
DNA (2226bp) protein (742aa)
Methionine--tRNA ligase id=3973380 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
methionyl-tRNA synthetase rbh
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_6
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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7252..8136
DNA (885bp) protein (295aa)
Putative methicillin resistance protein id=3973377 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
methicillin resistance protein
Tax=GWC2_Spirochaetes_52_13_curated
S18_scaffold_737_curated_7
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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comp(8133..9467)
DNA (1335bp) protein (445aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9) rbh
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=3973373 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
Tax=GWC2_Spirochaetes_52_13_curated
S18_scaffold_737_curated_8
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists


9905..10186
DNA (282bp) protein (94aa)
30S ribosomal protein S6 id=4579199 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
30S ribosomal protein S6
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_9
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

10205..10711
DNA (507bp) protein (169aa)
Single-stranded DNA-binding protein id=4579200 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
single-strand binding protein
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_10
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists


10734..11042
DNA (309bp) protein (103aa)
30S ribosomal protein S18 id=4579201 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
30S ribosomal protein S18
Tax=GWC2_Spirochaetes_52_13_curated
S18_scaffold_737_curated_11
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

11056..12009
DNA (954bp) protein (318aa)
Putative uncharacterized protein id=4579203 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
hypothetical protein
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_12
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists


12023..12622
DNA (600bp) protein (200aa)
50S ribosomal protein L9 id=4579205 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
50S ribosomal protein L9
Tax=GWC2_Spirochaetes_52_13_curated
S18_scaffold_737_curated_13
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

12645..14039
DNA (1395bp) protein (465aa)
Replicative DNA helicase id=4579207 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
replicative DNA helicase rbh
Tax=GWC2_Spirochaetes_52_13_curated
S18_scaffold_737_curated_14
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(14033..15424)
DNA (1392bp) protein (464aa)
Peptidase M50 id=4579210 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
peptidase M50 rbh
Tax=GWC2_Spirochaetes_52_13_curated
S18_scaffold_737_curated_15
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(15421..16602)
DNA (1182bp) protein (394aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267) rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase id=4579214 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_16
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(16684..17526)
DNA (843bp) protein (281aa)
Putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase id=4579216 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
Tax=GWC2_Spirochaetes_52_13_curated
S18_scaffold_737_curated_17
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(17523..18254)
DNA (732bp) protein (244aa)
Isoprenyl transferase id=4579218 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
undecaprenyl diphosphate synthase
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_18
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(18254..18808)
DNA (555bp) protein (185aa)
Ribosome-recycling factor id=4579220 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
ribosome recycling factor
Tax=GWC2_Spirochaetes_52_13_curated
S18_scaffold_737_curated_19
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(18864..19199)
DNA (336bp) protein (112aa)
Elongation factor Ts id=4579222 bin=GWC2_Spirochaete_52_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
translation elongation factor Ts
Tax=BJP_08E140C01_Spirochaeta_53_29
S18_scaffold_737_curated_20
unknown

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comp(19366..19683)
DNA (318bp) protein (106aa)

This feature has no annotations

S18_scaffold_737_curated_21
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20301..20780
DNA (480bp) protein (160aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
Pathogenesis-related protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F557_9RHIZ
hypothetical protein
S18_scaffold_737_curated_22
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20861..21619
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036829D5 rbh
DNA/RNA helicase, superfamily I {ECO:0000313|EMBL:EJJ27304.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
Displaying 22 items

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