ggKbase home page

S19_scaffold_2066_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S19_scaffold_2066_curated_1
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..840
DNA (840bp) protein (280aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546};; 4-hydroxy-2-keto-pentanoic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
mhpE; 4-hydroxy-2-ketovalerate aldolase (EC:4.1.3.-) rbh
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=HOA_CARHZ rbh
S19_scaffold_2066_curated_2
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

873..1667
DNA (795bp) protein (265aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QSY2_SPHPG rbh
Zn-dependent hydrolase rbh
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AEV30164.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
S19_scaffold_2066_curated_3
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1702..2922
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FK80_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EMS72232.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein rbh
S19_scaffold_2066_curated_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2912..3508
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B2U3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57062.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase
S19_scaffold_2066_curated_5
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3530..4297)
DNA (768bp) protein (256aa)
IclR family transcriptional regulator n=1 Tax=Acetonema longum DSM 6540 RepID=F7NHW9_9FIRM
IclR family transcriptional regulator {ECO:0000313|EMBL:EGO64348.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
IclR family transcriptional regulator
S19_scaffold_2066_curated_6
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4616..5437
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Desulfotomaculum RepID=F0DLA9_9FIRM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF94916.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
S19_scaffold_2066_curated_7
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5495..5806
DNA (312bp) protein (104aa)
yfjR; Uncharacterized oxidoreductase yfjR (EC:1.1.-.-)
Uncharacterized oxidoreductase yfjR {ECO:0000313|EMBL:CDF85145.1}; EC=1.1.-.- {ECO:0000313|EMBL:CDF85145.1};; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
tRNA methyltransferase n=1 Tax=Clostridium arbusti RepID=UPI0002882F4C
Displaying 7 items

View Taxonomy