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S19_scaffold_1411_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S19_scaffold_1411_curated_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..735)
DNA (735bp) protein (245aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
Glucose-6-phosphate isomerase n=2 Tax=Clostridium botulinum A RepID=G6PI_CLOB1
S19_scaffold_1411_curated_2
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(850..2745)
DNA (1896bp) protein (632aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJZ2_ALKMQ rbh
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KJF25597.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
polysaccharide biosynthesis protein CapD rbh
S19_scaffold_1411_curated_3
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2900..3466)
DNA (567bp) protein (189aa)
RNA polymerase sigma factor n=2 Tax=Clostridium tetani RepID=U6EXY5_CLOTA
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:CDI49568.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
S19_scaffold_1411_curated_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3450..3827)
DNA (378bp) protein (126aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2SP94_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK68083.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
transcriptional regulator
S19_scaffold_1411_curated_5
unknown

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4013..4228
DNA (216bp) protein (72aa)

This feature has no annotations

S19_scaffold_1411_curated_6
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4253..4516)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZL89_9CLOT
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_1411_curated_7
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4513..5763)
DNA (1251bp) protein (417aa)
DNA polymerase IV n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A6G9_DESDJ rbh
nucleotidyltransferase/DNA polymerase rbh
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_1411_curated_8
unknown

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comp(5904..6035)
DNA (132bp) protein (44aa)

This feature has no annotations

S19_scaffold_1411_curated_9
unknown

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6219..6728
DNA (510bp) protein (170aa)

This feature has no annotations

S19_scaffold_1411_curated_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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6731..7405
DNA (675bp) protein (225aa)
ABC transporter related protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DKF4_DESRL rbh
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS20216.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
ABC transporter-like protein rbh
S19_scaffold_1411_curated_11
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7425..8000
DNA (576bp) protein (192aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DKF5_DESRL
RND family efflux transporter MFP subunit
Tax=S_Thermoanaerobacterales_50_218
Displaying 11 items

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