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S19_scaffold_939_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S19_scaffold_939_curated_1
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1863)
DNA (1863bp) protein (621aa)
DNA gyrase subunit B (EC:5.99.1.3) rbh
DNA gyrase subunit B n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DRH9_9FIRM rbh
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_939_curated_2
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2137..3240)
DNA (1104bp) protein (368aa)
DNA replication and repair protein RecF n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ET31_9FIRM rbh
recF; recombination protein F rbh
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_939_curated_3
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3280..4389)
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta (EC:2.7.7.7) rbh
DNA polymerase III subunit beta n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E0H7_9FIRM rbh
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_939_curated_4
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4541..5881)
DNA (1341bp) protein (447aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRV6_9CLOT rbh
dnaA; chromosomal replication initiator protein DnaA rbh
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_939_curated_5
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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6223..6357
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DNM0_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
hypothetical protein
S19_scaffold_939_curated_6
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6433..6771
DNA (339bp) protein (113aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
rnpA; ribonuclease P protein component RnpA (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Eubacterium infirmum F0142 RepID=H1PJE0_9FIRM
S19_scaffold_939_curated_7
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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6807..7001
DNA (195bp) protein (65aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Fusobacterium nucleatum subsp. polymorphum ATCC 10953 RepID=A5TSF0_FUSNP
UPF0161 protein
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_939_curated_8
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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7020..7712
DNA (693bp) protein (231aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H079_9FIRM
60 kDa inner membrane insertion protein
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_939_curated_9
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7732..8559
DNA (828bp) protein (276aa)
KH domain protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EJF6_9FIRM rbh
Predicted RNA-binding protein
Tax=BJP_IG2103_Clostridiales_50_15
S19_scaffold_939_curated_10
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

8673..10052
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
tRNA modification GTPase MnmE n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E0H1_9FIRM rbh
trmE; tRNA modification GTPase TrmE rbh
S19_scaffold_939_curated_11
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10358..11434
DNA (1077bp) protein (359aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Eubacterium infirmum F0142 RepID=H1PJE4_9FIRM rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
Displaying 11 items

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