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S21_scaffold_19_curated

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Displaying items 1-30 of 844 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S21_scaffold_19_curated_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..88
DNA (87bp) protein (29aa)
transposase ISL3 n=1 Tax=Pseudomonas stutzeri RepID=UPI0002DCD045
transposase for insertion sequence element IS1001
Transposase for insertion sequence element IS1001 {ECO:0000313|EMBL:AEJ07340.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_19_curated_2
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(361..1257)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=J7DAL4_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB69796.1}; TaxID=1249470 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR1079.;"
hypothetical protein
S21_scaffold_19_curated_3
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1413..1670
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00038009DA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL59257.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alkylphenolia.;"
S21_scaffold_19_curated_4
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1692..3461
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI00030BA1FE rbh
type I restriction-modification system, odification subunit
Type I restriction-modification system, odification subunit {ECO:0000313|EMBL:AIL59256.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alkylphenolia.;"
S21_scaffold_19_curated_5
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3547..5880
DNA (2334bp) protein (778aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Thauera sp. 28 RepID=N6YHA5_9RHOO rbh
type I restriction-modification system methyltransferase subunit rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
S21_scaffold_19_curated_6
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5877..7721
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=M1MP29_9SYNC rbh
Uncharacterized protein {ECO:0000313|EMBL:EXU79419.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
hypothetical protein rbh
S21_scaffold_19_curated_7
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7721..8995
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003800791 rbh
Type I DNA specificity S subunit {ECO:0000313|EMBL:BAQ67979.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophilum (Rhodobacter sulfidophilus).;"
restriction endonuclease subunit S
S21_scaffold_19_curated_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9006..11969
DNA (2964bp) protein (988aa)
Type III restriction enzyme, res subunit n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J4L6_COMT2 rbh
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:ACY32274.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
type III restriction enzyme, res subunit rbh
S21_scaffold_19_curated_9
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12464..13480)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=8 Tax=Pseudomonas syringae pv. actinidiae RepID=S6L2K7_PSESF rbh
Uncharacterized protein {ECO:0000313|EMBL:EPN37177.1}; TaxID=1194405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. actinidiae ICMP 19096.;"
hypothetical protein rbh
S21_scaffold_19_curated_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14076..16490)
DNA (2415bp) protein (805aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
DNA gyrase subunit B n=1 Tax=Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221) RepID=F8H2H9_PSEUT rbh
gyrB; DNA gyrase subunit B rbh
S21_scaffold_19_curated_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16487..17599)
DNA (1113bp) protein (371aa)
DNA replication and repair protein RecF n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2MUZ0_PSEU6 rbh
recF; recombination protein F rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_19_curated_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17609..18712)
DNA (1104bp) protein (368aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
DNA polymerase III subunit beta n=4 Tax=Pseudomonas stutzeri RepID=A4VFF9_PSEU5 rbh
dnaN; DNA polymerase III subunit beta rbh
S21_scaffold_19_curated_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18746..20206)
DNA (1461bp) protein (487aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Pseudomonas stutzeri RepID=F2MUY8_PSEU6 rbh
dnaA; chromosomal replication initiation protein rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_19_curated_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20862..21257
DNA (396bp) protein (132aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
Ribonuclease P protein component n=3 Tax=Pseudomonas stutzeri RepID=RNPA_PSEU5
rnpA; ribonuclease P
S21_scaffold_19_curated_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21250..21495
DNA (246bp) protein (82aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Pseudomonas stutzeri RepID=YIDD_PSEU5
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
S21_scaffold_19_curated_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21498..23168
DNA (1671bp) protein (557aa)
Membrane protein insertase YidC n=2 Tax=Pseudomonas stutzeri RepID=F2N3F1_PSEU6 rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
yidC; putative inner membrane protein translocase component YidC rbh
S21_scaffold_19_curated_17
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23241..24608
DNA (1368bp) protein (456aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
tRNA modification GTPase MnmE n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JJ43_PSEST rbh
trmE; tRNA modification GTPase TrmE rbh
S21_scaffold_19_curated_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24893..27202
DNA (2310bp) protein (770aa)
NADH dehydrogenase n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JLK2_PSEST rbh
NADH dehydrogenase {ECO:0000313|EMBL:EPL60629.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
NADH dehydrogenase rbh
S21_scaffold_19_curated_19
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27199..27600
DNA (402bp) protein (134aa)
Monovalent cation/proton antiporter subunit, putative n=3 Tax=Pseudomonas stutzeri RepID=F2N3E8_PSEU6
monovalent cation/proton antiporter subunit
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA86218.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_19_curated_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27602..27985
DNA (384bp) protein (128aa)
Multicomponent potassium-proton antiporter, subunit C, putative n=4 Tax=Pseudomonas stutzeri RepID=A4VS78_PSEU5
multicomponent potassium-proton antiporter subunit C
Multicomponent potassium-proton antiporter, subunit C, putative {ECO:0000313|EMBL:AEJ07491.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_19_curated_21
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27982..29502
DNA (1521bp) protein (507aa)
cation:proton antiporter n=1 Tax=Pseudomonas stutzeri RepID=UPI0002D37F82 rbh
NADH dehydrogenase rbh
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA86216.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_19_curated_22
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29499..29843
DNA (345bp) protein (115aa)
Na+/H+ ion antiporter family protein n=4 Tax=Pseudomonas stutzeri RepID=A4VS76_PSEU5
Na+/H+ ion antiporter family protein
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA86215.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_19_curated_23
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29846..30106
DNA (261bp) protein (87aa)
Putative cation efflux system protein n=4 Tax=Pseudomonas stutzeri RepID=A4VS75_PSEU5
putative cation efflux system protein
Putative cation efflux system protein {ECO:0000313|EMBL:ABP81826.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
S21_scaffold_19_curated_24
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30103..30495
DNA (393bp) protein (131aa)
Multicomponent potassium-proton antiporter, subunit G, putative n=2 Tax=Pseudomonas stutzeri RepID=F2N3E3_PSEU6
multicomponent potassium-proton antiporter subunit G
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA86213.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_19_curated_25
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30905..32797
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N3E2_PSEU6 rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA rbh
S21_scaffold_19_curated_26
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32797..33444
DNA (648bp) protein (216aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
Ribosomal RNA small subunit methyltransferase G n=3 Tax=Pseudomonas stutzeri RepID=F2N3E1_PSEU6 rbh
gidB; 16S rRNA methyltransferase GidB rbh
S21_scaffold_19_curated_27
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33463..34251
DNA (789bp) protein (263aa)
ParA family protein n=4 Tax=Pseudomonas stutzeri RepID=A4VS71_PSEU5 rbh
ParA family protein rbh
ParA family protein {ECO:0000313|EMBL:AEJ07484.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM; 5965 / LMG 11199 / NCIMB 11358 / Stanier 221).;"
S21_scaffold_19_curated_28
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34261..35133
DNA (873bp) protein (291aa)
Chromosome partitioning protein ParB n=2 Tax=Pseudomonas stutzeri RepID=A4VS70_PSEU5 rbh
parB; chromosome partitioning protein ParB rbh
ParB protein {ECO:0000313|EMBL:AEA86209.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
S21_scaffold_19_curated_29
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35324..35665
DNA (342bp) protein (114aa)
F0F1-type ATP synthase, subunit I n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GU43_PSEST
ATP synthase protein I {ECO:0000313|EMBL:EPL60640.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
F0F1-type ATP synthase subunit I
S21_scaffold_19_curated_30
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35680..36552
DNA (873bp) protein (291aa)
ATP synthase subunit a n=3 Tax=Pseudomonas stutzeri RepID=ATP6_PSEU5 rbh
atpB; F0F1 ATP synthase subunit A rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
Displaying items 1-30 of 844 in total

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